Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0603 ATGGGGAAAGGAACTATTAGTAGCAGTGGAGGTGACAACAGAGATGCATATTTGCAACTATCAGTTACTGTTCTTGCTGCATTCTGTCGTGTTCCGGAGATTGCTTCATCTGAAGATATGGTCTTAAAGATTCCTTTGATATTGGAAATTTTGTCCAAGCAATCAGGCTCACATGTTGTTGAAGAGTGCTACGAATTTTTATTTCTTGTGTCTACTTCTTGTGAAGATGGAGTCTCAGCATTGTACAAATCTGGAGGCTTAAGGGTGCTAGCTTCCCAAATGTCTACTTTGGCAGATGGTTCACACTCACAGGCACTGGCTATGAAACTTGTGCAGTTGATGCTTAGTACAGTGTCCCTGGACATCATTAATAATGAATATTCATCAGAACTGTCAATGATGGTGGCTGTAATAGCAAGGGAATTCGCTGTGTTGCATGATGCCCTGAAATTTGAAGCACTCCACCTGCTTTCTGCTATCCTCTCCTCAAAATATTCTGCACCAGTGCATGACACTCTTCGCATAATGTCTAATGACATTTGGTCGACATATGTGCGAGTTGGTATTGTGGCCATTTTACAGAATCGTGTTGCACCTGCTGAAAAGCTTCAGGCTTTGATCCTGGCAGAGTCTGTGATATCTATACTGGGGGAGAGGTGGCTGCTTGGTCAGATGAACTTACCTGATGCAAAAGACTCTGTTCCTGCTGACAGGTGTCTTTTACTTGTCTTAGAGTCATCAAGGGTTGAAGTTGCTGTTTTGTTGAATGAGCTTGCCTACCTGAAATATGAAACTTCTAATAACTCTTCATCCAATGCTGAAATAATTTCTTTAAAGCAACGGAACCTGGCTATTGCTTTTTCTTTGGTAGAGAAGACAATTAAGCTTATCTCAAATGTAGTTGAAGATGAAGTGAACCCGATTGATGAAAACACTTTGTCGAAGGTTATCTCTGGGCTTAATGAGACAGTTGGTGTAGTTTTAGAGTATTTACAAGATGCAAAGGATCATGGACAAAAGAAAGGAGATGATCTTCTTGCTTCAGTGCGGCTTATTGGGAGCTATCTTGCAGAAACACCCCTTGCTTGCAGAGAGAAGGTTAGAGAACTTCTGGAGTTTATGCTCTCGATTGAAGGTGAAGATGAACCAAGACCTTTTTTCTCCATATGCTTTTTACTCCCAATGCTATGTCAAATAACAATGGAAATTGAAGGATGCAAAATTTTGGTATCTTGTGGAGGACAAAAAGCTGTTGTGGAATGCCTCATAAAATTGATTGGTCCAAATGGTTGTATGATTGAGGATAAGGGTTGCATATTCTTGGCGTGTGATACAATTCTGAATCTTCTTCTCAAGAGAGATCAAATTAAATTTCGATTGGACGAATCTACTTCTGTTCATCTTCTGAAAGCATTAGCATATTGGACAGAGGAAACTGATGAACCATCTATAGTTATGATGGCCTCAAGCATTTGTGCTCTGATATTTGATCATACATCAGAGCAGGCTCTTCTAAATCATCCCAACATTGATCATAGCACTATTGCTAGTCTGTCTCAGCTCATCGTGAGAAGTTTGGCTACGTGTGCGCAGAACATGGGTGATGATATGAAATCAGACTTGGATCTTCTTGACATTGTTACTGCAGGATATTCTCGATGGTCCCATAGGTTCCCCCATATAAAAGCAGCCGTTGGGAGATTGAGTTAA 1710 0.4064 MGKGTISSSGGDNRDAYLQLSVTVLAAFCRVPEIASSEDMVLKIPLILEILSKQSGSHVVEECYEFLFLVSTSCEDGVSALYKSGGLRVLASQMSTLADGSHSQALAMKLVQLMLSTVSLDIINNEYSSELSMMVAVIAREFAVLHDALKFEALHLLSAILSSKYSAPVHDTLRIMSNDIWSTYVRVGIVAILQNRVAPAEKLQALILAESVISILGERWLLGQMNLPDAKDSVPADRCLLLVLESSRVEVAVLLNELAYLKYETSNNSSSNAEIISLKQRNLAIAFSLVEKTIKLISNVVEDEVNPIDENTLSKVISGLNETVGVVLEYLQDAKDHGQKKGDDLLASVRLIGSYLAETPLACREKVRELLEFMLSIEGEDEPRPFFSICFLLPMLCQITMEIEGCKILVSCGGQKAVVECLIKLIGPNGCMIEDKGCIFLACDTILNLLLKRDQIKFRLDESTSVHLLKALAYWTEETDEPSIVMMASSICALIFDHTSEQALLNHPNIDHSTIASLSQLIVRSLATCAQNMGDDMKSDLDLLDIVTAGYSRWSHRFPHIKAAVGRLS* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0603 569 PANTHER NEUROCHONDRIN 9 565 IPR008709 -
Vvi4g0603 569 Pfam Neurochondrin 7 506 IPR008709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0603 Vvi-Chr4 5905223 5929924 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0603 - - vvi:100260969 1075.85