Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0597 ATGTCGTCTGTAAAGATACTAGAAGAATCTTCATCTGCGAATCCTCTTGTGCTTCGACTTCAACAAATTCTAACCTCATGTTCCAGATCAATCGAAACTGGAGATCTCCATAAATCTGGAAGCTCAGTGTCGGAGCTCGTGAACTACCTTGATTCGATTTCCGATGCTGCTTTATCTGATACGAGCAATGAAGAATCGAGAAACAATGCGCTCGAAGTTCTCTCGGAGATTCACCTGTATATATGCCAGCCCTTGTTGGACCAGGCGGTTGTGGATGCTCTTTCTTTTGAGTTGCCTAAGGCGGTTGCTAAGTTTGCATGCGTCTCTGGCAAATGTCTGGAGATTGTTGAGAGTATTGTCAATCAGTTTGTAGCGACTTGTAGCCCTCGGGATTTGATTCCGATTTTCTGCGAGGCATTAGATGTTCCAAGTGGGATGTCCAAGGCTCCTAATTATTATGCTCCTTTTCTAAGTGGGCTATCAAAAGTATTTCTTTCCATTCCAAGACGTCATTTTGAGCAAGTAAAAGAAGCAGTCCCTGTTATCCTTAGTGTTTTGAAGGCCATGACTTCAGAGTTAGATGATGAAGACACAAATTCTGAGGATTTGTTTGCCAGAGCCATCAGCATTGCCAATTCTATACAAACAGTTTGTGGAAAGTTGGCGGGCAGGCTAAATGAAAAACTCCGTGCTCTACTTGGCTTGTTTGTCTTGCAAATCATGTCTCTTCTCTGTATGAGGGAGAAAGTTTCAAGCTGTCTTACCTTGGTGTTACAACTATCCCACTTCCTTCCATATTGTGGCTTATCCTATCTTGGTTTACTTACTGGATGTGATGTTGACACAATTATTGATATTGTTCTTAAAGAATGCACAGAGGATGGAGATGATTATATAAGTTGTTTTCCCTATGTCAAGCATGGAGCATCTCTTGCAGTGATTTGTGGCCATATGTCAAACATGGTCGCTCAATCAGCTGAGGAGGATTTGACTGTCCTTAAGGATGCTCTTCAAAGTAACCAGACTAAAAGATGGCAGGCAGTGGGCATGTTAAAGCACATATTTTCCTCTGCCAATCTGCCATGGGAGTTAAAGAAACATACCATCAACTTCTTGCTTTGGATTATGGATGGGAATCTATCTGAAAAATGTAATGATGAAGTTTCAGACTGCTCATCTTATGTGCCTGGTCTTTTTGCTTCTTTGCAGGCTATTGAGATGGTCATTATGTACACATCAGATTCAGTGCTAAGGAGGAATGCTTTTAATTCTTTCAAAAAGGTACTTGCCGATATTCCAACCTCTCCACGGTTTGACATTTTAAAAGCGTTGATTGCAAATAGCAATTCTTCTTCCATGACTGCAATTCTTGTAGATTGTGTTAGAGAGGAAATGCGTATGGAAAATTGCCAAAGAATTTCTGTAGGACATGATGAATTCTTGCAAGCTGAAAAATCCTGCCAAAGTTCATTGTTTTGGAGTGCAGATGTTCTCGAATTGGTGGAATTGATTTTGAGACCTCCTAAGGGAGGACCCCCAGCCCTTCCTGAGGATAGCGATGCGGTTCTATCTGCTCTTAACCTTTACAGATTTGTATTGATAACAGAGTCAACAGGGAAAACCAATTGCACAGGGGTGTTATCCAAGAACAATTTACACAAGGCATACAACGAATGGCTTCTACCTCTTCGAACTTTGGTAACAGGCATTGAGGCTGAAAACAAGAATGATTATGACCAACTTGTGGTTGACATGGTATGTGCCCTCAATCCTGTTGAATTAGTCTTGTATCGTTGTATTGAGCTTGTCGAAGAAAAATTGAAACAATAG 1830 0.4109 MSSVKILEESSSANPLVLRLQQILTSCSRSIETGDLHKSGSSVSELVNYLDSISDAALSDTSNEESRNNALEVLSEIHLYICQPLLDQAVVDALSFELPKAVAKFACVSGKCLEIVESIVNQFVATCSPRDLIPIFCEALDVPSGMSKAPNYYAPFLSGLSKVFLSIPRRHFEQVKEAVPVILSVLKAMTSELDDEDTNSEDLFARAISIANSIQTVCGKLAGRLNEKLRALLGLFVLQIMSLLCMREKVSSCLTLVLQLSHFLPYCGLSYLGLLTGCDVDTIIDIVLKECTEDGDDYISCFPYVKHGASLAVICGHMSNMVAQSAEEDLTVLKDALQSNQTKRWQAVGMLKHIFSSANLPWELKKHTINFLLWIMDGNLSEKCNDEVSDCSSYVPGLFASLQAIEMVIMYTSDSVLRRNAFNSFKKVLADIPTSPRFDILKALIANSNSSSMTAILVDCVREEMRMENCQRISVGHDEFLQAEKSCQSSLFWSADVLELVELILRPPKGGPPALPEDSDAVLSALNLYRFVLITESTGKTNCTGVLSKNNLHKAYNEWLLPLRTLVTGIEAENKNDYDQLVVDMVCALNPVELVLYRCIELVEEKLKQ* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0597 609 Coils Coil 323 343 - -
Vvi4g0597 609 SUPERFAMILY ARM repeat 59 446 IPR016024 -
Vvi4g0597 609 PANTHER GLOMULIN 15 609 IPR019516 -
Vvi4g0597 609 Pfam Uncharacterised protein family, YAP/Alf4/glomulin 58 209 IPR013877 -
Vvi4g0597 609 Pfam Uncharacterised protein family, YAP/Alf4/glomulin 369 577 IPR013877 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0597 K23345 - vvi:100264691 1197.19