LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi4g0592	ATGCTCAGCACATTTTCAACTCCATGTTTTTCTTTTTCTTCTTCTTATTCTTCTTCGTCAACATGTTCTCTTCAACAACAAGGCTGTGTTCAACCACCTCAACTTTCAGTGAAGAAGACACATAACTTCCTCAAGAGCTGCTATTGCAGCAACCCTTTCAAATGTTGTTCAGAAGGGTTTTCTTCTTCAGTTAACATTCAGCATTTAACATTCAAATCCCACAAGAGAAACCCCATTCATGTTTCATCAGAATATGGGTATCCATCAAAGCCTGAGGATCAGAATCATGTTTCTAAGCAATTGAGAGCTTTCTATCTATTTTCTCGCCCACATACTATAATTGGAACTGTCATTGGAATCACATCAGTTTCTCTTCTTCCATTAGAAACAATTTCAGATTTGTCTCCAGCATTTTTTGTTGGATTGTTGAAGGTTAACAAACCTGAGCTTCCTCTAGCTTCTGGGGATTTCTCTATGGAAACTGGAAGTCAAATTGTATTCATATCCTTACTGATGAGTGTTGGCATGGGAATTATGTTCCAATCCCCACCTTTGTTTTGTGCCCTTCTCATAAGTTTTCTGCTTGGAACTGCATATTCTATTGAAATTCCCTTGCTAAGATGGAAAAGATATCCACTCCTAGCTGCCTCATGCATCTTGATTGTGAGGGCTATTGTCGTTCAACTCGCATTCTTTGCACACATCCAGGATATACCTGATGTGGATGGTGATAGAGAATTTGGAATTCAATCCTTTACTGTCAAACTAGGACAAAAGAAAGTATTTTGGCTATGCGTTAACATGCTGCTAATGGCATATGGAGCTGCCACAGTTATTGGAGCCTCATCTTCCTCCATGCCTATCAAGTTTGCCACTGTGTTTTGCCATTGTGCACTTGCATTGGTCCTTTGGGTCCGAGCTCAATCCGTCGATCTCAGTAGCAAAGAAGCAGTGACTTCCTTCTACATGTTCATTTGGAAGGCAAGTGAATCGATCTCTATATATCATCGCGTTGGCATGTTCAAAATGGTTAGATGTTTCTCTTCTTTTGCCAAGGATTATCCCAAAATGGGCAGTCAAATGGGATGTTAA	1092	0.3993	MLSTFSTPCFSFSSSYSSSSTCSLQQQGCVQPPQLSVKKTHNFLKSCYCSNPFKCCSEGFSSSVNIQHLTFKSHKRNPIHVSSEYGYPSKPEDQNHVSKQLRAFYLFSRPHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLKVNKPELPLASGDFSMETGSQIVFISLLMSVGMGIMFQSPPLFCALLISFLLGTAYSIEIPLLRWKRYPLLAASCILIVRAIVVQLAFFAHIQDIPDVDGDREFGIQSFTVKLGQKKVFWLCVNMLLMAYGAATVIGASSSSMPIKFATVFCHCALALVLWVRAQSVDLSSKEAVTSFYMFIWKASESISIYHRVGMFKMVRCFSSFAKDYPKMGSQMGC*	364

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi4g0592	363	Pfam	UbiA prenyltransferase family	231	327	IPR000537	GO:0016020\|GO:0016765
	Vvi4g0592	363	Gene3D	UbiA prenyltransferase	217	345	-	-
	Vvi4g0592	363	PANTHER	HOMOGENTISATE SOLANESYLTRANSFERASE, CHLOROPLASTIC	24	144	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi4g0592	Vvi-Chr4	5713208	5717621	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi4g0592	K09833		-	vvi:100257787	580.867