Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0591 ATGGTTCCTACTATTGGGGATACTCGATTGGCCGAGCAGGAGGCCAAGGTTGAGAGGCTCGAGTCCATGATGAGACAGATCAGATTGCAAGACGGAGGTTTGACTTGGGATGACAGAGATGGCATACCGGCGGCCAGCTTGCCCGCCAAGTTTCGCATGCCAGACATTGAGCGCTACAGTGGGATTGGTTGTCCCAAGATCCACTTGAGATTATACTGCACTGTCATGAGGGCGCACGGGATAGATGATGCACAGTTGGTGGCCCTCTTTCCCATGTCACTTAGTGGGGCAGCTCAGAGATGGTTTGCTTCAGTTGAGCCTTCGAGACTCCGCACTTGGGAGGATGTGGCTCGTGAGTTCTTGACCCAGTTCGCTTTCAGTGCCGATATTGACGTATCTAGACGAGAGTTGGAGGCCACTAGACAGAGGCCAGATGAGTCTATTTCTTCCTTTGTCACTCGTTGGAGGGCGAAGGTGGCTGGTATGATAGACCGGCCTAAGGAGCAGGATCAGATTGATATGGTTCTTCGGAACCTACAGCCGAGGTTCGCTAGACGTCTGGTGGGCATCCCATTTCAGGATCTTAGGAGTTTGGTTCATGCTGCTTTCAGTGTAGAGGATGCTATGGCTCGAGGATTATGGACAGATACTGCTACTTCCCTTGACAGTAAAGGGAAGAAGCTGATTGGACCATTGACCAGATTTAGAGAGGTTGGTGCTATTAGCTATCAGCACCAGAGGCCCGCGCATCACTCAGCTTATAGGTCTCCTACAGTCAGAGCTCCTTTCTCTCTTCCACAGTATCAGTATCAGCTGGATTATGCTCAGGAGCCTTACATTGCTCAGACTAGCATGCAGCCGCGACCACCACATCCGAGAGCCGCTACTCACCCACCGCCTAGACCATATGCACAGAGGCCCCCGAGGCAGTTCACTCCCTTGGGCATGACTTTGACTAGAGCTTTTGAGAAGCTCAAAGACGCTGGAGTGATTGTTCCTTTGGCGCCGAGGCCTTTGCCCCATCCTATTCCTCCTCATTTCCGTTCACATGAGCATTGCTTGTATCATCAGATTCCGGGGCACGATACTGAGCATTATTCAGCACTCCATCATGCGATACAGGATTTGATCGATTTAGGGGTGGTTGACTTGGCTAGGCCAAGTGTGACCACCAATCCCCTGCCTGCACATTCTACACACGCAGTTCCTCCTCCTCCTGGTCTTCAGTAG 1230 0.5187 MVPTIGDTRLAEQEAKVERLESMMRQIRLQDGGLTWDDRDGIPAASLPAKFRMPDIERYSGIGCPKIHLRLYCTVMRAHGIDDAQLVALFPMSLSGAAQRWFASVEPSRLRTWEDVAREFLTQFAFSADIDVSRRELEATRQRPDESISSFVTRWRAKVAGMIDRPKEQDQIDMVLRNLQPRFARRLVGIPFQDLRSLVHAAFSVEDAMARGLWTDTATSLDSKGKKLIGPLTRFREVGAISYQHQRPAHHSAYRSPTVRAPFSLPQYQYQLDYAQEPYIAQTSMQPRPPHPRAATHPPPRPYAQRPPRQFTPLGMTLTRAFEKLKDAGVIVPLAPRPLPHPIPPHFRSHEHCLYHQIPGHDTEHYSALHHAIQDLIDLGVVDLARPSVTTNPLPAHSTHAVPPPPGLQ* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0591 409 MobiDBLite consensus disorder prediction 291 307 - -
Vvi4g0591 409 PANTHER CCHC-TYPE DOMAIN-CONTAINING PROTEIN 28 388 - -
Vvi4g0591 409 MobiDBLite consensus disorder prediction 390 409 - -
Vvi4g0591 409 Coils Coil 10 30 - -
Vvi4g0591 409 MobiDBLite consensus disorder prediction 283 310 - -
Vvi4g0591 409 Pfam Retrotransposon gag protein 89 179 IPR005162 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0591 Vvi-Chr4 5708942 5710171 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0591 - - vvi:104879663 762.681