Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0587 ATGTCTGACCACCATTCCTCTCCGTTCCCTTCATGCTTCAGGCCACCATCCGCCCCTGCAGCAGCCGCCGCCGCCGCCGTTGACCACCTCCGGCCGCCGGAGGCGCCTGCCGGTTCCGGGAACCCCAATCTCGCCACCTGCGTCTACCACACGGATCTTGGCATCTTCACTCTCACCTGGTCCCGCAACTTCTTCGGCCGATCCCTCCACCTCCAGCTCCACCCCTCCGCCGCCGCTAACCTCTCTCCTCTTTCTCTTTCCAACCCTCTTTCGCTCTCTACCCCAGCTTTTCACCTCCATATCAAGCCCTTTGTCTTCTGGAAGAAGTATGGGTCCAAGAAGCTCCACGTAGCCGGTGCTCCCGGAGGTCGGGATATTCGTGTATTTTGGGATCTCACACGAGCTAAATTTGGATCCTGGCCGGAACCCCAGCACGGATTCTACGTCGCTGTGGTCGCCGACGGCGAGATGATCCTTCTGGTGGGGGACTCTGAGAAAGAAGCTTACAACAAAACCAGAGCTAAAAAGGCTGAGAGAACGCAAGTTTTGGTTTTGAGAAGAGAGCATGTGTTTGGAAACAAGGTTTACACAACAAGAGCGAGCTTCGGAGGGAAAACCAGGGAGATTAGCATAGATTGCAGCGTGGGAGACGACCCGAGACTCTCCTTCAGCGTTGATCGGAAAAGGGTCTTGCAGATAAAGCGGCTCAAGTGGAAATTCAGAGGAAACGAGAAGATTGAAGTTGATGGGATCCCAATACAGGTGTCGTGGGACGTGTACAACTGGTTGTTCGACGATGTAATGGAGAGCCATGCAGTGTTCATGTTCAAGTTCGAGAGAGTAGGGTTTGAGGAAGAAGACGAAGAGTTGCAGCAGCAGCAGCAGCATTTGAATGAGAAGAACGGGATGGCGCTGTGTGGGTTTGGGATGAACGGAATCGAGAGGAAGAAGATGAAGAAGAGCCTGCTGAAAACTACCAGAAGCTCATCATCATCTTCCCTGTCTTCAGCTTCATCTGGGTGCAGTTCTTCTGTGATGGAATGGGCAAGCACGGAGGAGATGGAGTTGAAGAGCCCTTCTGGGTTTTCCCTTCTGGTTTACGCTTGGAAGAGCTGA 1116 0.5349 MSDHHSSPFPSCFRPPSAPAAAAAAAVDHLRPPEAPAGSGNPNLATCVYHTDLGIFTLTWSRNFFGRSLHLQLHPSAAANLSPLSLSNPLSLSTPAFHLHIKPFVFWKKYGSKKLHVAGAPGGRDIRVFWDLTRAKFGSWPEPQHGFYVAVVADGEMILLVGDSEKEAYNKTRAKKAERTQVLVLRREHVFGNKVYTTRASFGGKTREISIDCSVGDDPRLSFSVDRKRVLQIKRLKWKFRGNEKIEVDGIPIQVSWDVYNWLFDDVMESHAVFMFKFERVGFEEEDEELQQQQQHLNEKNGMALCGFGMNGIERKKMKKSLLKTTRSSSSSSLSSASSGCSSSVMEWASTEEMELKSPSGFSLLVYAWKS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0587 371 PANTHER EXPRESSED PROTEIN 20 370 IPR008586 -
Vvi4g0587 371 Coils Coil 280 300 - -
Vvi4g0587 371 Pfam Plant protein of unknown function (DUF868) 42 370 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0587 Vvi-Chr4 5662685 5663800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0587 9 277 EF-hand Containing Proteins AT5G28150 38.406 4.79e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0587 - - vvi:100262872 625.55