Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0585 ATGATCATGGCTCGCTTCATCAGAGCCGTTCAAAGGACCCTCCGTCTTCCTCCTCTTCAACGCTCCTCTAAAACCCTAATTCATGGTCTGCAACTGCCTTCCCTCCAATCGCATAACGCCACCTCCAAATTCATATTCCAAACTCGGTCTTACCAAAACTCTTTCGAAATTCTCAAATCGCCCTTCGAGTCCAACGTTCTCAGAATCCTTCGCAACGAGATCGAATACCTAACGGAAGATGGGCCTCCTAATCAGCCTCCCAGGATATTCAATTCCTTTACTGTTGAAGATCACCCTGGTCAGCAGTGGGTTACATTGAGAAGCAAATTTAGGGAGAAAGAAGACATTAAAATTGACGTTACAATGTTTGATGGGTGCATTTTTATTCCGAAACTTGATGATGATTTCAATGAAAATGATATCACTGGGCAAGAACTGCGTCCCCACATTAGTTTACTTGTTGACATTTCAAAAGGGGAGGATTGTGATATGTTGGAATTTGTGTGCTCAGCATGGCCAGACTCTTTGGAGATTCAGAAAGTGTTCATCTATCGACATGGACGGTTGCTTCCTAGGCCTTGGTTGGGACCTGGTTTTAAGAGTCTGGATTATAAGCTTCAGAATGCACTTTGTGAGTTCTTGGAGGAAAGGGGGGTAAATGATGAACTTTCTGTTTTCTTGCATGAATATATGATGAACAAGGATAGAACTGAGCTTATCCAGTGGTTGAGAAATGTCAAGTCTTTTGTGGAGAAATAG 759 0.4269 MIMARFIRAVQRTLRLPPLQRSSKTLIHGLQLPSLQSHNATSKFIFQTRSYQNSFEILKSPFESNVLRILRNEIEYLTEDGPPNQPPRIFNSFTVEDHPGQQWVTLRSKFREKEDIKIDVTMFDGCIFIPKLDDDFNENDITGQELRPHISLLVDISKGEDCDMLEFVCSAWPDSLEIQKVFIYRHGRLLPRPWLGPGFKSLDYKLQNALCEFLEERGVNDELSVFLHEYMMNKDRTELIQWLRNVKSFVEK* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0585 252 Gene3D Mitochondrial glycoprotein 62 250 IPR036561 -
Vvi4g0585 252 PANTHER COMPLEMENT COMPONENT 1 31 251 IPR003428 GO:0005759
Vvi4g0585 252 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 62 251 IPR036561 -
Vvi4g0585 252 Pfam Mitochondrial glycoprotein 91 250 IPR003428 GO:0005759
Vvi4g0585 252 FunFam Mitochondrial glycoprotein 62 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0585 Vvi-Chr4 5637197 5639581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0585 K15414 - vvi:100245704 517.309