Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0575 ATGTATCACCCTTTCAGATTTCTAGTATTTCTAGGATTTCTCTTCACTTTGATTCTCCACTGCCATGCGGATCCGGGTTCAGGTTGCTCTAAAACTAGCCCTCTCCTTCATTTCGAATCCGATATCGAAATGGTCCAGCACCAATTACGAGGTCTCATCAAAGTCCTCGATGATTGTTCTTTTAGGGTTTCTGAATTCGATATGCTTCCTGGGTCCGACGTCCACTGGTGGGGCGCCGCCGGACCCGATTTTGCTAATCTCACTTCTGGGTTTGTCATTGCCGATGATAAATTGAACAAAACCTATAAAAATGAGAGCTTTGTGGTTCGTTTGAGGAGTAATTTGACTTGGGATCGAATCGGCGTGCTGGCCGTTTGGGACATTCCCACAGCTTCAGATTTTGGGCATGTCGTTATGGGAGATCCTAGGAATGGATCGGGGAATATTGCTGTAAGCCCGGATTTAGCGCCATCGCCGGCGATGGAGCCCAACTCGAGTACAGTTAGGAACAGGACTGGTGGGGTGCCCACGATGTTTGAGAATTGTAAGGTGCTGTCGCCAAACTATAGGGTTAGGTGGACGTTGAGTGCTGATGAGGATTCAATTGATATTGGCTTGGAGGCAGCAACTGGGTCAATGAATTACATGGCATTCGGATGGGCAGACCCAAAGTCAACTTACTCACCTATGCTGGGGGCTGATGTGGCGGTGGCAGGGTTTACAGAGGACGGTTTGCCATTTTCTGATGATTATTACATTACCAAATATAATGAGTGTATGATAAACAAGAATGGATTGGTTCAGGGGGTTTGTCCAGACACAATGTATGAAGGGTCAGACCCTGATGGGTTGGTGAACAATACCAGATTGGTTTATGGGCATAGGAAGGATGGTGTGTCCTTCGTTCGGTATCGGCGGCCATTGAAGTCTGTTGACAAGAAGTATGATTTGCCAGTGAATCATACTGGTAATATGACAGTGATTTGGGCTTTGGGGTTGATACGCCCGCCCGATACTCTTCGCCCATACTATCTGCCCCAAAATCATGGTGGTCCCATGCTAGTGACATATGGGCATTTGGTTCTTAATGTTTCGGAACATGTGAATGATTGCTTGGGGCCATTAGATGCAGAAGACAAGGAGGATCAGGATTTGATTATTGCAGATGCCAATGTTCCTCTTGTTGTTGTGACAAGTCCTGCACTGCACTATCCTAACCCGCCAAACCCGTCAAAGGTTCTATACATTAACAAGAAAGAGGCTCCATTTTTGAGAGTAGAAAGAGGAGTACCTGTGAAGTTTTCAATACAAGCTGGGCATGATGTTGCACTATACATTACTTCTGATCCACTTGGTGGGAATGCTACTTTGAGGAATGTGTCTGAAACTGTTTATGCAGGAGGAGCAAATGCACAAGGAGTACTAGCTAGTCCAATGGAGTTAGTTTGGGCACCTGATAGGAATACCCCGGATCAAGTTTACTATCAGTCTTTGTATACACAAAAAATGGGTTGGAAAATTCAGGTGGTCGACGGGGGTCTATCAGACATGTATAATAACAGTGTTCTTTTGGATGATCAGCAGGTTACATTATTTTGGACCTTGTCTGAAGATTCAATATCTATTGCAGCTCGAGGTGAGAAGAAAAGTGGTTATCTTGCTATAGGATTTGGTAGTGGAATGGTGAATTCATATGCTTATGTGGGTTGGATTGATAATGACATAGGGAGGGTAAACACTTACTGGATTGATGGGAAGGATGCGTCCAGCGTGCATCCGACTAATGAGAATTTGTCACATGTAAGGTGCAAGTCAGAAAATGGCATGATCACCTTTGAGTTTACCAGGCCCTTGAAGCCACCATGTAGTCGGGCTGAAAGGCGGGAGTGTAACAACATTGTTGACCCCACAACTCCTCTTAAAGTTGTTTGGGCCATGGGAGCTAAATGGTCAGGAGACCACTTAAGCGAGAGAAATATGCATTCTGCTACAAGCAGTAGGCCTGTCCGTGTGCTGCTTATGCGTGGTTCGGCAGAGGCAGAGCAGGACCTACGACCAGTATTGGCTGTACATGGCTTTATGATGTTTCTTGCATGGGGTATTTTGCTTCCAGGTGGAATATTGGCAGCTAGATACTTAAAACATGTGAAGGGTGACGGATGGTTCCAGATTCATGTATACTTGCAGTACTCAGGATTGGCAATTGTCCTACTTGGCTTTCTTTTTGCTGTTGCTGAGCTTCGTGGTTTCTATTTCAGCTCATTACATGTTAAGTTTGGAATTACAGCTATCTTTTTGGCTTGTGTGCAGCCAGTGAATGCATCACTAAGGCCCAAGAGATCTGCTAATGGAGAAACGGTCTCCAGTAAAAGACTTGCATGGGAGTATCTCCACGTTATTGTTGGTAGATGTGCCATCGTTGCAGGGATTGCGGCACTTATCAGTGGGATGAAGCATTTAGGAGATAGATATGGTGGTGAAAATGTTGAAGGACTTAATTGGGCTTTAATAATTTGGTTCTTGCTTGGTGCGTTAACAGTCGTATATTTAGAGTATCGTGAGAAAAAGCGAGAGAAGGATAGGAACTCTGAAAGAAGCAGTTGGGTTTTGGGAAGATGA 2619 0.449 MYHPFRFLVFLGFLFTLILHCHADPGSGCSKTSPLLHFESDIEMVQHQLRGLIKVLDDCSFRVSEFDMLPGSDVHWWGAAGPDFANLTSGFVIADDKLNKTYKNESFVVRLRSNLTWDRIGVLAVWDIPTASDFGHVVMGDPRNGSGNIAVSPDLAPSPAMEPNSSTVRNRTGGVPTMFENCKVLSPNYRVRWTLSADEDSIDIGLEAATGSMNYMAFGWADPKSTYSPMLGADVAVAGFTEDGLPFSDDYYITKYNECMINKNGLVQGVCPDTMYEGSDPDGLVNNTRLVYGHRKDGVSFVRYRRPLKSVDKKYDLPVNHTGNMTVIWALGLIRPPDTLRPYYLPQNHGGPMLVTYGHLVLNVSEHVNDCLGPLDAEDKEDQDLIIADANVPLVVVTSPALHYPNPPNPSKVLYINKKEAPFLRVERGVPVKFSIQAGHDVALYITSDPLGGNATLRNVSETVYAGGANAQGVLASPMELVWAPDRNTPDQVYYQSLYTQKMGWKIQVVDGGLSDMYNNSVLLDDQQVTLFWTLSEDSISIAARGEKKSGYLAIGFGSGMVNSYAYVGWIDNDIGRVNTYWIDGKDASSVHPTNENLSHVRCKSENGMITFEFTRPLKPPCSRAERRECNNIVDPTTPLKVVWAMGAKWSGDHLSERNMHSATSSRPVRVLLMRGSAEAEQDLRPVLAVHGFMMFLAWGILLPGGILAARYLKHVKGDGWFQIHVYLQYSGLAIVLLGFLFAVAELRGFYFSSLHVKFGITAIFLACVQPVNASLRPKRSANGETVSSKRLAWEYLHVIVGRCAIVAGIAALISGMKHLGDRYGGENVEGLNWALIIWFLLGALTVVYLEYREKKREKDRNSERSSWVLGR* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0575 872 ProSiteProfiles DM13 domain profile. 36 140 IPR019545 -
Vvi4g0575 872 ProSiteProfiles Cytochrome b561 domain profile. 655 852 IPR006593 -
Vvi4g0575 872 PANTHER OS09G0557700 PROTEIN 15 871 IPR045879 -
Vvi4g0575 872 Gene3D - 667 861 - -
Vvi4g0575 872 Pfam Electron transfer DM13 45 138 IPR019545 -
Vvi4g0575 872 CDD Cyt_b561_FRRS1_like 677 852 - -
Vvi4g0575 872 ProSiteProfiles DOMON domain profile. 187 332 IPR005018 -
Vvi4g0575 872 CDD DOMON_DOH 185 332 IPR045266 -
Vvi4g0575 872 ProSiteProfiles DOMON domain profile. 527 647 IPR005018 -
Vvi4g0575 872 SMART 561_7 690 817 IPR006593 -
Vvi4g0575 872 CDD DOMON_DOH 526 666 IPR045266 -
Vvi4g0575 872 Pfam DOMON domain 525 647 - -
Vvi4g0575 872 Pfam DOMON domain 187 332 - -
Vvi4g0575 872 SMART dm13 44 146 IPR019545 -
Vvi4g0575 872 Pfam Cytochrome C assembly protein 689 854 IPR002541 GO:0017004|GO:0020037
Vvi4g0575 872 SMART DOMON_3 215 332 IPR005018 -
Vvi4g0575 872 SMART DOMON_3 552 647 IPR005018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0575 Vvi-Chr4 5443704 5446333 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0575 - - vvi:100261073 1793.09