Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0548 ATGGCGTCTTCTAATTCCTCGAAGAGTCCGATGCTTCCGATATCGGATCCTCCGCGACCCGATGATAAGGTTTTCAAAGGATCCGCCATGTCCAAGAGAGGAGCCTACGCTGCAATCTCTTACATGTCCTGCGCAGTTCTATTGGTGATCTTCAACAAAGCAGCCCTTTCTTCTTATCATTTCCCTTGTGCAAGTGTCATCACACTCTTTCAGATAATATGTTCATGTTCTTTTCTCTATGCATTGAGACGCTGGAAGATTATTTCTTTCACACTTGGTGAATCTTCAAATGTTAATGATGGTTCCCCAGTTTTTGTACCGATCACAACGTTGATTCATACCCTTCCTCTTGCAATTACCTATTTGCTTTACATGCTAGTTACCATGGAGTCTGTTCGTGGAGTAAATGTTCCCATGTACACTACCCTTCGGCGTACTACAGTGGTGTTTACAATGTTTGTGGAGTATATTTTGGCTGGGCAGCGGTATACATCTTCTGTTGTTGGAAGTGTGGGCCTGATTGTTCTTGGTGCATTTATTGCGGGTGCTCGGGACTTGTCGTTTGATTCTTATGGTTATGCTGTTGTTTTCCTGTCCAACATCACTACGGCAATATACCTTGCAACCATAGCCCGTATAGGGAAATCTAGTGGCCTTAATAGCTTTGGCCTAATGTGGTGTAATGGGATACTATGTGGACCAATATTGTTGCTTTGGACCTTTATTCGGGGCGACTTAGGGATGGCCATGAATTTTCCTCATTTTTTTTTGCCTGGTTTTCTGGTCGTGTTGCTGCTCTCCTGTATACTGGCATTCTTCTTGAATTACAGCATATTCCTGAATACAACTCTAAATTCAGCGGTCACACAGACAATTTGCGGCAATCTAAAGGATTTGTTTACCATTGGACTTGGCTGGATGATTTTTGGGGGGCTTCCTTTTGATATTTTGAACATTACAGGACAATTTCTGGGTTTTCTTGGTTCTGGCTTGTATGCCTACTACAAGCTCATAGGGAAGTAA 1023 0.4282 MASSNSSKSPMLPISDPPRPDDKVFKGSAMSKRGAYAAISYMSCAVLLVIFNKAALSSYHFPCASVITLFQIICSCSFLYALRRWKIISFTLGESSNVNDGSPVFVPITTLIHTLPLAITYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMFVEYILAGQRYTSSVVGSVGLIVLGAFIAGARDLSFDSYGYAVVFLSNITTAIYLATIARIGKSSGLNSFGLMWCNGILCGPILLLWTFIRGDLGMAMNFPHFFLPGFLVVLLLSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWMIFGGLPFDILNITGQFLGFLGSGLYAYYKLIGK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0548 340 MobiDBLite consensus disorder prediction 1 21 - -
Vvi4g0548 340 PANTHER SOLUTE CARRIER FAMILY 35 36 336 - -
Vvi4g0548 340 Pfam Triose-phosphate Transporter family 44 332 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0548 Vvi-Chr4 5049066 5059447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0548 16 277 Organic Solute Cotransporters AT2G13650 24.908 5.43e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0548 K15281 - vvi:100256151 660.218