Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0544 ATGCTGTCTCCAACACCAGTCTCTCTTTTCTGTACTCTCCTTCTCTGCCTACCCCTCGCCGTTGTCTTCACCATCAACACTACAACCACCCCTCCCACCTCTTCTTCCGATGCAACCGGAAAAAATGACAAACCCAGAAACATTAACACCAAAACCCCCATTTTCTCAGCTCCGCCGCCTCCGCCTATGATTGTCCCGGAGGATGACAAGTCATTGTTTCGAGTTGCAGCCCGAGTTAACCCCAAACCCTCACCTCCAGGAGCAGCGAAAAAGCTTGCTTTCATGTTCCTCACCACCACACCACTCGCATTTGCGCCGCTGTGGGAAATCTACTTCAACTCCACCCACCCCAATCTCTACAACATCTACATCCACGCTGACCCCACTTCCCACTACGACTCACCGTTTCAGGGCGTCTTCTCCAACCGAGTCATCCCCTCCAAACCCACTCACCGATTCACACCCACTCTCATCTCAGCGGCGCGACGCCTCCTCTCACATGCCCTCCTCCACGACCCATCCAACTACATGTTCACTCTGCTGTCTTCTTCTTGTATCCCTCTCCACTCTTTCAATTTCACTTATGAAACCCTGATAAGGTCGAAGAAGAGCTTCATTGAGATTTTGAAGAATCAACCAGGGATCGAGGCCAGGTGGGCCGCGCGTGGGGAAGAGGTGATGCTGCCGGAGGTGACATTGGAGAGTTGCCGAATCGGGTCCCAGTTTTGGACACTGACACGTAAGCACGCTAGGTTAGTTGTGCGTGACGAGCGGCTATGGTCTAAGTTCAAGCTGCCGTGCCTGCATTGGGACACATGTTACCCTGAGGAGAATTACTTTCCTACCCTTCTGAGCATGCGAGACCCACGTGGGTGCATTCCAGCTACGCTCACGCACGTGGACTGGAGGGGCCGCAGTGACGGTCACCCCCACACGTATGAGCCAGCGGAAGTGGGCCCAGAGTTGATCTTGACGCTCCGGTCTGACAGACCCAGATACGGTGATGAGGAAACCAACGGCTCTGTTCCATCCTCTACCCAACGCCATGACCCCTTCTTGTTCGCTAGAAAATTTTCTCCGGATTCAATCCAACCGTTGATGAGTATAGCCAGTGATGTCATCTTCAAAGACTAG 1134 0.5326 MLSPTPVSLFCTLLLCLPLAVVFTINTTTTPPTSSSDATGKNDKPRNINTKTPIFSAPPPPPMIVPEDDKSLFRVAARVNPKPSPPGAAKKLAFMFLTTTPLAFAPLWEIYFNSTHPNLYNIYIHADPTSHYDSPFQGVFSNRVIPSKPTHRFTPTLISAARRLLSHALLHDPSNYMFTLLSSSCIPLHSFNFTYETLIRSKKSFIEILKNQPGIEARWAARGEEVMLPEVTLESCRIGSQFWTLTRKHARLVVRDERLWSKFKLPCLHWDTCYPEENYFPTLLSMRDPRGCIPATLTHVDWRGRSDGHPHTYEPAEVGPELILTLRSDRPRYGDEETNGSVPSSTQRHDPFLFARKFSPDSIQPLMSIASDVIFKD* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0544 377 MobiDBLite consensus disorder prediction 30 53 - -
Vvi4g0544 377 MobiDBLite consensus disorder prediction 30 61 - -
Vvi4g0544 377 Pfam Core-2/I-Branching enzyme 92 326 IPR003406 GO:0016020|GO:0016757
Vvi4g0544 377 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 65 368 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0544 Vvi-Chr4 5004885 5006018 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0544 - - vvi:100254263 745.347