Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0543 ATGCCTAGGCCAGGCCCAAGGCCTTATGAGTGTGTGAGGAGAGCTTGGCACAGTGATAGGCATCAACCCATCAGGGGCTCTCTCATTCAAGAAATTTTCAGGGTTGTCAATGAGATTCATAGCTCTGCAACAAAAAAGAACAAGGAATGGCAAGAGAAGCTCCCTATTGTTGTTTTGAAAGCTGAAGAAATTATGTACTCCAAAGCCAACTCTGAGGCTGAATACATGGATCTTAAGACTCTTTGGGACCGGGCAAACGATGCCATTAACACTATAATTCGAAGAGATGAGAGTACTGAAACTGGAGAGTTTCTTCAGCCTTGTATTGAAGCCTCTCTAAATTTGGGTTGCCCACAGAGAAGGGCATCGAGGAGCCAGCGAAATAATAATCCGAGATGTTACCTCACTCCCAGCACTCAAGAACCCATCAGTATTTCCCCCAGCATTTTAGAGAATTCCCCTCAGGGGAATCATACAACCATTTCGCAGGTTATGTCTCGCTACGCAACCTTTATAAAACCCTCATCCATGAGTGTGATCCAGCCTGGTTTGGAACCTCACAGCACTGCTTTCCACAACAATGATTGCCCCACTAGCAAATTCCTCTTTTCCTCTGAGAACTGTCCTCCATCTGGTAATAAGTGCTTACAAATGGAAGTTTATCCTGCTTCGAACGTATGTGCAGTTTATCCCTTGTATGATGGAAACCAGCTTCAATGTGAAGAATCCCAGTGTGGTTTTGGTGTTCAATCCCATCCAAAGTCTAACCCTATGGAGCCTGCAGGGATGGGTACCATACAAAACCTTTTCTCTTATGCTATAGATCCTACAAAGAAGCCCAGTCAGACGGATTTTGGTCATGTTACTGAGAACTCTCCCAAGATTGACTGTGATCTGTCATTGCGGTTGGGCCCTCTCTCAATTCCCTGTGTAAGTGTAGAAAACAGTTGGCCCCAAGAGTTTGAGGATGTTGGTTCCAGTTGTTCCCGGGAAGGGAGCAAGTTCAGTGATCTGTCACCACAAGTGGATAAACAGTTCCCTTTCTTCCCCAGGGGCAATACTGATGACCCATTAGACTCCTGCTTGAGTAAAAGGAGTTCTGAGGGTGAGAATTTGAATATGGAAGCAACGATGAGAAAGCGGAAGGCAGTTATTAGTTACCCATTGGAGGATCGCCAATTTTGTTGCCAGCCAAAGCTTCCATATAACTACCTTCCTGGAAGAATGAGAAATGCAGAAATGTTATATTTAACTAAATGCTACCTGTGGAACTTAAGTCCTTATGATGCTGCCTATAAAAAAGATGTTATACTCGTCAGTAGTATCTGCTTGATTAAAATTTGGGTGAATAAATAA 1356 0.4381 MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEEIMYSKANSEAEYMDLKTLWDRANDAINTIIRRDESTETGEFLQPCIEASLNLGCPQRRASRSQRNNNPRCYLTPSTQEPISISPSILENSPQGNHTTISQVMSRYATFIKPSSMSVIQPGLEPHSTAFHNNDCPTSKFLFSSENCPPSGNKCLQMEVYPASNVCAVYPLYDGNQLQCEESQCGFGVQSHPKSNPMEPAGMGTIQNLFSYAIDPTKKPSQTDFGHVTENSPKIDCDLSLRLGPLSIPCVSVENSWPQEFEDVGSSCSREGSKFSDLSPQVDKQFPFFPRGNTDDPLDSCLSKRSSEGENLNMEATMRKRKAVISYPLEDRQFCCQPKLPYNYLPGRMRNAEMLYLTKCYLWNLSPYDAAYKKDVILVSSICLIKIWVNK* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0543 451 Gene3D Coactivator CBP, KIX domain 11 82 IPR036529 GO:0003712|GO:0006355
Vvi4g0543 451 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 1 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0543 Vvi-Chr4 4977381 4979720 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0543 - - vvi:100266444 855.129