Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0542 ATGAAGTGGTTGCCATGGCCGTCAACCTCCGCAAGCAGGAACTTCCAAGTGAAGGTCCATGGATTCAAGCTCCAAGGATTCAATTTACAGGATACAGAATCTTCACAAGACAAATTTATGGTACTTGCGATGAAGCTCAAACGCCCTTGCAATTCCGGACTCTTCTCATTTCATCGAAAATACCAAAAATTTAGCAGCCAAGTTTTCTTGACAAGAGCTGAATCCATTGAATGGCACCAGGAGTTCGATGCTGTCTGCAGCCTCTCTGTCTCCCAAAAGGATCATTCCCTTCGACCGCGCCACGTTTCCTTTAGTATTTTACATGGAGAGGGCCGAGAATTGAAGGCAAAGTCAGTGGTTTTGGGGAAGGTTTCGCTGAATTTAGCGGAATTGGCATCAAAGATGGAGACGGATATTCAAACAAAGCTTCCGATTTCTTTGCAGGTCGCCGGAATTGCCATGGAAGCTACGCTTTCGGTATCTGTGAGCTTCATGGAGCTCAGAAATGCTCAAGACTCGACCCAACTCGGTCAAAACCCGACCAAGTCAGACCATGGAGACAGGTTCTCAAGAAGACTGGAAGGCCTGAACCCCAATGCGAATAACCAAAAGATGAATCAAGAGGTGAGTACGGATTATTCGGACGAGTCGGCCCTATTTGACTCGGACGATCCCAGCATGGAATCGAGCTCTTCGACTGAGTCGGGATCGTCTCCGAGTTCTGATACTCAGTCGGACCCGGTCCGGATGACTGGGTCGTGGAAGAGGAGGCGGTGTTTTACACCGGCGAGAACGAAAGTAGACCCGTTGATAAAGAATACTAGAGTAGTCAAGGATGTGAACGAGACGAACAGCGGTTCAACAAGGAAAACAGATTCTGAGAAGCCAACTTTTCAATCAGATTCTCAGTACCCAAAATGCAATACAGGCAGCTGGGAAGTGAAGGAAGTGGAGAGTCGAGATGGCCAAGCCAAGCTCAAAGCCAGCGTCTTCTTTGCTTCCTTCGACCAATGCAGTGTGCAAGCAGCAGGACAGAGCGCCTGCACCGCTTTAGTTGCGGTTGTCGCCCATTGGCTTCATTCCAACCAATACATCCTGCCAACAAGGTCCCAGTTCGACAATCTCTTAACACAGGGTTCTTCAGAGTGGCGGAAGCTTTGTAATAACCACATCTACCAGGGCTGCTTCCCTGACAAGCATTTTGATCTTGAAACAGTTCTACAGGCTGATCTTCGGCCTCTATCCGTCTTGCCTGATAAATCTTTAGTCGGGTTTTTTAGCCCAGAAAAGTTTGTGTCCTTGGAGGGAACCGTGTCATTTGAAGGTATATGGAATGAGATCAATGGCCAGAATGAAGATCAGGAACCAAGAGTTTATATAGTCAGTTGGAATGATCATTTTTTCGTTTTGAAGGTGGAAGCCCAGGCTTGTTACATCATTGACTCATTGGGGAAGCGCTTGTTTGAAGGGTGCAACCAGGCATATATACTCAAGTTTGATGGCTCTGCTGTAATGTATGGAAAAGCAAAGAAAGATGGTGCCATTAACAATGAGAAAGGAGAGATAATTTGTAGGGGTAAAGAGTGCTGTAAGGAGTTCATTAAAAGGTTTCTTGCAGCTATACCAGTTGGGGAGCTTGAGGTGGAACAGAAGAAAGGGACAGTTTCACTTGTCACTCTATATAGGCGACTGCAGATCGACTTCCACTTTACTTCATCTTCACCTTCATCGTCCTTTTCTCCTTCTATTCCTGCTACCTCTTCTACTTCCTCACTCTCCTCAAAGGAGTGA 1791 0.4657 MKWLPWPSTSASRNFQVKVHGFKLQGFNLQDTESSQDKFMVLAMKLKRPCNSGLFSFHRKYQKFSSQVFLTRAESIEWHQEFDAVCSLSVSQKDHSLRPRHVSFSILHGEGRELKAKSVVLGKVSLNLAELASKMETDIQTKLPISLQVAGIAMEATLSVSVSFMELRNAQDSTQLGQNPTKSDHGDRFSRRLEGLNPNANNQKMNQEVSTDYSDESALFDSDDPSMESSSSTESGSSPSSDTQSDPVRMTGSWKRRRCFTPARTKVDPLIKNTRVVKDVNETNSGSTRKTDSEKPTFQSDSQYPKCNTGSWEVKEVESRDGQAKLKASVFFASFDQCSVQAAGQSACTALVAVVAHWLHSNQYILPTRSQFDNLLTQGSSEWRKLCNNHIYQGCFPDKHFDLETVLQADLRPLSVLPDKSLVGFFSPEKFVSLEGTVSFEGIWNEINGQNEDQEPRVYIVSWNDHFFVLKVEAQACYIIDSLGKRLFEGCNQAYILKFDGSAVMYGKAKKDGAINNEKGEIICRGKECCKEFIKRFLAAIPVGELEVEQKKGTVSLVTLYRRLQIDFHFTSSSPSSSFSPSIPATSSTSSLSSKE* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0542 596 MobiDBLite consensus disorder prediction 278 304 - -
Vvi4g0542 596 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 73 169 IPR019448 -
Vvi4g0542 596 ProSiteProfiles C2 NT-type domain profile. 5 166 IPR019448 -
Vvi4g0542 596 MobiDBLite consensus disorder prediction 223 250 - -
Vvi4g0542 596 PANTHER C2 NT-TYPE DOMAIN-CONTAINING PROTEIN 202 579 - -
Vvi4g0542 596 MobiDBLite consensus disorder prediction 171 259 - -
Vvi4g0542 596 MobiDBLite consensus disorder prediction 572 596 - -
Vvi4g0542 596 MobiDBLite consensus disorder prediction 195 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0542 Vvi-Chr4 4971042 4974478 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0542 - - vvi:100264556 1114.75