Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0537 ATGCAAATCTGCAGATCTGTTCCGTCTTGGATTTGTCATATCGTTGCATGCATGGGAGGTTGTCTTGGATGCTGTAGTAAGCCCACAGAGATTATTGGTGTGTATGAGTCACCAAAGGGACTGACAATTCAAGGAAGAACAGCAATGAGACCTAGCCCAGTAGAGGATTTCTGGAGCACTAGCACAGGTTTGCTTCTCTGGAATCAGACAAGGCAGCAATGGATTGGAAATCAAAAGTCTCAGAACAGGAAACAAGTTCAAGAACCCAGAATAAGTTGGAATGCAACATATGAGAGTTTACTGGGGACCAACAAGCCTCTCCCCCAGCCTATCCCTCTCCCTGAAATGGTAGATTTTCTTGTTGATGTCTGGGAGCAGGAGGGCTTATACGATTGA 396 0.4545 MQICRSVPSWICHIVACMGGCLGCCSKPTEIIGVYESPKGLTIQGRTAMRPSPVEDFWSTSTGLLLWNQTRQQWIGNQKSQNRKQVQEPRISWNATYESLLGTNKPLPQPIPLPEMVDFLVDVWEQEGLYD* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0537 131 PANTHER OS07G0479600 PROTEIN 6 62 - -
Vvi4g0537 131 Pfam Protein of unknown function (DUF4050) 90 131 IPR025124 -
Vvi4g0537 131 Pfam Protein of unknown function (DUF4050) 47 89 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0537 Vvi-Chr4 4899408 4905868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0537 - - vvi:100254371 263.848