Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0533 ATGAAGTTCTGGAAGAGCCTGAGCAATTTGATTGAAGAGACGCTGCCTGCTTGGCGAGACAAGTTCTTGTCGTACAAGGACTTGAAGAAGCAGCTAAAGCTGATCTACCCTAAGGCCGATGATGCGCATCCGAATAAACGCGCCAGATCGGACGGTGGAGGCGGAGAGGCCAGTGACGTGACAAAGGAGGTGACCGATTTCGTGAGGCTGTTGGAGGACGAGATCGAGAAATTCAATATTTTTTTTGTCGAGAAAGAGGAAGAGTACGTCATTAAATTGAAGGAGCTGCAAGATGGAGTGGCAAAAATGGACTCGAATGAAGAGTTGATGAAAATAGGTAGAGAGATAGTAGATTTCCATGGAGAGATGATTTTGCTGGAGAATTACAGTGCCCTTAATTATACAGGCCTTGTGAAGATACTGAAGAAGTACGACAAGCGAAGTGGTGCTCTCATTCGCTTGCCCTTCATCCAAAAGGTCTTGCAAGAGCCATTCTTCACGACCGACGTGCTTTACAAGCTTGTGAAAGAGTGCGAGACAATGCTGGATCACCTCTTCTCTATGAACAAAGAGCCCTCAGCCTCCTCGTCTAAAGGGACTAAAGGAAAGGAACCGAATGACCCAGATACTACCACAGAAAGTAAAGAAAGGCAGCTCAAAGTTCCTAAAGAACTTGCAGAGATAGAGCATATGGAGAGCATGTACGTAAAGCTCACTCTATCAGCGCTGCGAGTTCTGAAGGAGATTCGGAGTGGAAGCTCAACTGTTAGCACCTTTTCATTGCCTCCTTTGCAGACGAATTCCATGGAGGAAACGTGGAAGAAAAGTACTGTTTTAGAACAAGCAGCCAAGTAG 855 0.4596 MKFWKSLSNLIEETLPAWRDKFLSYKDLKKQLKLIYPKADDAHPNKRARSDGGGGEASDVTKEVTDFVRLLEDEIEKFNIFFVEKEEEYVIKLKELQDGVAKMDSNEELMKIGREIVDFHGEMILLENYSALNYTGLVKILKKYDKRSGALIRLPFIQKVLQEPFFTTDVLYKLVKECETMLDHLFSMNKEPSASSSKGTKGKEPNDPDTTTESKERQLKVPKELAEIEHMESMYVKLTLSALRVLKEIRSGSSTVSTFSLPPLQTNSMEETWKKSTVLEQAAK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0533 284 CDD SPX_AtSPX1_like 2 147 - -
Vvi4g0533 284 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 270 IPR031142 GO:0016036
Vvi4g0533 284 Pfam SPX domain 111 160 IPR004331 -
Vvi4g0533 284 MobiDBLite consensus disorder prediction 202 221 - -
Vvi4g0533 284 MobiDBLite consensus disorder prediction 189 221 - -
Vvi4g0533 284 ProSiteProfiles SPX domain profile. 1 158 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0533 Vvi-Chr4 4848214 4851436 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0533 - - vvi:100264658 560.451