Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0525 ATGAGTGAACTCTCTATCTATTTGCTTGTTGATGGTGGGGAAGTACTCCTCCTCTCTCCTACTCCAATGGCTTCTGCCGCATGCTTGGTATCTTTAAACCCATTTAGTGCCCTACTCAAACCAGGGGTTCGTCCTGGCTTTCAAAAATTTCCTGCAACTAAATTCAGCCCTCCCAAGGCTGCACAAAGTAATTCAAAAGGCACAAAACCAAACAGTGTTGTGTGTGCTGATTGTGATGGAAATGGTGCAGTTCTATGTTCACAATGCAAAGGCAGTGGAGTGAACTCTGTTGATTTCTTCAATGGCCAATTTAAAGCTGGAGAATCATGTTGGCTTTGTGGAGGCAAAAAGGATATTTTATGCGGAAATTGCAATGGTGCTGGTTTCGTGGGCGGTTTTATGAGCACTTTTGATGAATAG 420 0.4333 MSELSIYLLVDGGEVLLLSPTPMASAACLVSLNPFSALLKPGVRPGFQKFPATKFSPPKAAQSNSKGTKPNSVVCADCDGNGAVLCSQCKGSGVNSVDFFNGQFKAGESCWLCGGKKDILCGNCNGAGFVGGFMSTFDE* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0525 139 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 63 134 - -
Vvi4g0525 139 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 70 130 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0525 Vvi-Chr4 4816141 4817854 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0525 - - vvi:100854903 292.737