Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0523 ATGAAGCTCTGGAGAAGGGCTTCTGGGACTTTGAAAGACAAGAACAGCATGTTGATTGCAAGTCTGTCAAGTAGGAATGCTCCCTGGAACCCAAGATTTGAGGTGACAATCATAAAAGCTACAAGCCATGACGAATCAGAAGTGGATTATGAGAACATCAAACGAGTCTTTGCATGGCTGCATGCTTCTCCAGCCTACCTAAAGCCTCTTCTCTCTTCTCTCTCTACGCGTCTGCAGAAGACATGTAGTTGGGTGGTGGCCTTAAAGGGTCTGGTGCTCATGCATGGTGTTCTCCGTTGTAACATCCCCGCTGTGCAGAACATCGGTCGCTTGCCATTTGATCTATCGAATTTCAGAGATAGTTACAGGAAATCAGGAAGAACTTGGGGTTTAAACACTTTTGTTCAATCTTACTTTGCGTTTCTGGATCAAACATCTGCCTTCTTGTACATGGAACGGAAGGAAGAGAGCAAAGAAACAGAATCAGCCCTGGTGCAAGAGCTTGTGAAGCTGCAGCAATGGCAGTCATTGCTGGGTATCTTACTTCAAATCAGACCACAGGCCAAGGAAATGGATATAGCTCTTGTCTATGAAGCTATGAACTGCGTGATCATCGAGATTTTCAGTTTCTACAACAGAATCTGCAATAGGGTCGCAAGAGTTCTTACCGGGATATATGCAGCTGAAAAGGTTGAAGCAGCCATGGCACTTGAGATTCTTCAGAAAGCATCACAGCAGCGTGAACAACTCGCTCTATATTTAAATTTCTGCAGGAAGATTGGTGTTTTCAATGAGTCAAAATTCCCAGAAGTTGAACAGATCCCAAAAAAGGATATCCAAAAGCTTGAGCGGATTGTCAGTGGAGTCTCAGAAAATCAAGCCACGGTAGTGAAGACAATTGAACCCAAAGAGGAGCAGGAGGAACCCAAGAGGGTTTTAAAGACCATAATCACTGAAACGTGGGAGGTTTTTGATGAAGACCCAGACAGCAATGGAATTGGCTTCTCTAATATTCCAGGAAAAACAACTGTTGGGCAAAATCCTTCTGCAGCTCCTTTGAAATTTCCACCCAACACACATGGCCAGAAATATGATTTCCCAGATTTAATAAGTTTCTTGTAG 1122 0.4367 MKLWRRASGTLKDKNSMLIASLSSRNAPWNPRFEVTIIKATSHDESEVDYENIKRVFAWLHASPAYLKPLLSSLSTRLQKTCSWVVALKGLVLMHGVLRCNIPAVQNIGRLPFDLSNFRDSYRKSGRTWGLNTFVQSYFAFLDQTSAFLYMERKEESKETESALVQELVKLQQWQSLLGILLQIRPQAKEMDIALVYEAMNCVIIEIFSFYNRICNRVARVLTGIYAAEKVEAAMALEILQKASQQREQLALYLNFCRKIGVFNESKFPEVEQIPKKDIQKLERIVSGVSENQATVVKTIEPKEEQEEPKRVLKTIITETWEVFDEDPDSNGIGFSNIPGKTTVGQNPSAAPLKFPPNTHGQKYDFPDLISFL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0523 373 Gene3D ANTH domain 152 306 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Vvi4g0523 373 CDD ANTH_N_AP180_plant 33 148 - -
Vvi4g0523 373 SUPERFAMILY GAT-like domain 166 287 - -
Vvi4g0523 373 FunFam Putative clathrin assembly protein 7 153 - -
Vvi4g0523 373 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Vvi4g0523 373 SUPERFAMILY ENTH/VHS domain 33 148 IPR008942 -
Vvi4g0523 373 Gene3D - 4 151 IPR008942 -
Vvi4g0523 373 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 312 IPR045192 GO:0048268|GO:0072583
Vvi4g0523 373 Pfam ANTH domain 33 286 IPR011417 GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0523 Vvi-Chr4 4801184 4802305 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0523 - - vvi:100854866 742.651