Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0520 ATGGCGAAAGACGGCGGTTCCATCTCGGACGGCCTCCTGAGGAAGATCCTCCTTTCGTACGCCTACGTAGGCCTCTGGATCTTCCTCAGCTTCACCGTCATTGTCTACAACAAGTATATCCTGGACCCCAAAATGTACAATTGGCCTTTCCCCATTTCCCTAACCCTCATCCACATGGCCTTCTGCTCCTCCATCGCCTTCTTCCTCATCCGCATCCTCAAGGTTGTGGAGCCCGTCTCAATGTCTCGTCAGCTCTACATCTCCTCCGTCGTCCCCATCGGCGCTCTCTACTCCCTTAGCCTCTGGCTCTCCAATTCCGCCTACATTTACCTCTCCGTCTCCTTCATCCAAATGCTCAAAGCCCTCATGCCCGTCGCCGTCTACACCATCGGCGTCGTCTTCAAGAAAGAGGCTTTCAAGTCCGACACCATGTGTAACATGCTCTCCATCTCTCTCGGCGTCGCCGTTGCCGCCTACGGCGAGGCCCGATTTGATTCCTGGGGGGTTTGTCTTCAGCTGGGTGCGGTTGCCTTTGAGGCGACTCGGTTGGTCTTGATCCAGATTTTGTTGACCAGCAAGGGCATTTCGCTCAACCCCATCACTTCTCTCTACTACGTTGCACCTTGTTGTTTGGTGTTTTTGTTGGTGCCCTGGATTTTCGTGGAGTTGCCCATATTGAAGAACAATTCGAGTTTTCAATTTGATTTTGTGATATTCGGTACCAATTCCTTCTGCGCATTTGCCTTGAATTTGGCTGTATTTTTGCTTGTGGGGAAGACATCGGCATTGACGATGAATGTGGCCGGAGTGGTGAAGGATTGGCTGTTGATTGCTTTTTCTTGGTCGGTGATAAAGGACACGGTGACGCCGATCAATTTGTTTGGATACGGTTTGGCATTTTTGGGAGTTGGGTATTACAATCATTCAAAATTGCAGGCATTGAAGTCGAAGGAGGCTCAGAAGAAGACCACCCAGACAGATGAGGAAGCCGGGAGGTTGTTGGAGGACAGGGAAGGGGAAGCGGCTGGGAAGAAGAGCGATTCTGAGGCGTAA 1053 0.5128 MAKDGGSISDGLLRKILLSYAYVGLWIFLSFTVIVYNKYILDPKMYNWPFPISLTLIHMAFCSSIAFFLIRILKVVEPVSMSRQLYISSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYTIGVVFKKEAFKSDTMCNMLSISLGVAVAAYGEARFDSWGVCLQLGAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCLVFLLVPWIFVELPILKNNSSFQFDFVIFGTNSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVGYYNHSKLQALKSKEAQKKTTQTDEEAGRLLEDREGEAAGKKSDSEA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0520 350 PANTHER SOLUTE CARRIER FAMILY 35 20 315 - -
Vvi4g0520 350 Pfam Triose-phosphate Transporter family 21 307 IPR004853 -
Vvi4g0520 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 80 161 - -
Vvi4g0520 350 MobiDBLite consensus disorder prediction 316 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0520 Vvi-Chr4 4787471 4788523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0520 5 349 Organic Solute Cotransporters AT4G32390 83.526 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0520 - - vvi:100255990 676.781