Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0516 ATGAGAAGGGTCTCTTCGAAAATCTCTTCTTTTATATCCCAACGGTTTCTTCAGCCGAAACCTAAATTTCAAATCAATGTGTTTCGCTTTTACTGTGATCATCCCCATCTTTCTTCGCCAAAGCGTCCAGGACCTCTCACACGCTATAGGAATCTAGTTGAGCAAGGGAAGCTCCAACATGATCCTGACCAGGAAAGAGTTGCTCTGGAATTGGACAATTTACTTGGGAGGTTAGAGCAATATGAGAAAGAGATGGAGGAATATCATGTAACCCTAGCAAAGTGGGAGAATCAAAGGGAGAATGAGCGACGCAGGCTTTTGATGAAGGAAGCTGAGCTCAAACAACAGGGAGACATAGGGACAACTGTAAGCAAGTACCGGAATAGACTTGTTGAGAGATGGATGTTTCGGAAAAAACCTGACAATGTCGAACCAGGAGTGGGAAAATGGGTTTCATACCTTAATCGAGAAAAGAAGTTGGATACAGTAATTGGTCGGCGCCCAACTCCTCCTCCAGCTCCAAAAGGTTTATATTTGTATGGTAGTGTAGGAAGTGGAAAGACAATGCTTATGGATATGTTTTATAGTGCTACTGAAGGAATTGTTAAACATCGAAGAAGGTTTCACTTTCATGAGGCTATGCTTGAAATAAATGAACATATGCATAAAGTATGGAAGAATCAAGTGGAGGAAAAGTCTTTGCAGTCGAATATTTCTAGCTGGATTATGAATCTTCCTTTTGATACAAAAGTTAAAGAATGGTTAGCTGCGGAAGAAAGATATAAGCATGAGGTACAGATGAAAAACATTCTTCCTGCTGTAGCAGATAAGTTTCTTGTAGACCGAGAGATGGATCAAAGAGGGGCTAGCATTCTTTGCTTTGATGAGATTCAGACTGTTGATGTATTTGCTGTTGTGGCCTTATCTGGAATTATAAGCAGATTGTTGAGTACTGGAACTGTTCTTGTGGCCACCAGTAATCGAGCACCAAATGATTTAAACCAGGATGGCATGCAGAAGGAGATCTTCCTAAAGCTTGTTGCCAAATTGGAGCGGCACTGTGAGAATGTTTTGATTGGAAATGAGATTGATTATCGCCGCCTTATTGCACAGAGATCTATAAACAAAGCCCATTACTTCTGGCCTTTAGATGGTATTGCTTTTAAGAAATTTGAGGAAATGTGGCATGAGGTCATAAACCAATCAGGAGGAAAGGTTATATCTAGTACTATTCTGGTGATGTTTGGCAGAACATTGGAGGTTCCTGAGAGCTGTAATGGAGTGGCACGGTTCAAATTCGATTATTTATGTGGTCGGCCGGTGGGTGCAGCAGACTATATTGCAGTAGCTAAAAACTATCACACTGTTTTTATATCTGACATTCCTGTGATGAGTATGCGTATTCGTGACAAGGCAAGGAGGTTTATCACCCTTATTGATGAGCTATACAATCATCATTGCTGCCTGTTCTGTTCTGCAGCTTCTTCTATTGATGATCTGTTCCAAGGAACTGAAGAGGGAACCCTTTTTGATTTGGAGAGTTTCCAATTTGAAACAGAGACAGAAGGTGGGAAACTTCGCCGAAATGTTTTAGCAGAAGGTAATGTAGGTTCAGGAGGTGCACCAGCTGGCATAATATCACTGCTTTCGGGTCAAGAAGAGATGTTTGCCTTTCGCCGTGCAGTCTCGCGCTTGATCGAAATGCAGACACCTTTATACCTGGAAGGAGTTTGTGATCTTCATCCTTATTTCCAGATACAACCCCAGGAGCTCAGGGATGATAATGCAAGAACCTTACAATCTCAAACAACCTGCTGA 1818 0.4169 MRRVSSKISSFISQRFLQPKPKFQINVFRFYCDHPHLSSPKRPGPLTRYRNLVEQGKLQHDPDQERVALELDNLLGRLEQYEKEMEEYHVTLAKWENQRENERRRLLMKEAELKQQGDIGTTVSKYRNRLVERWMFRKKPDNVEPGVGKWVSYLNREKKLDTVIGRRPTPPPAPKGLYLYGSVGSGKTMLMDMFYSATEGIVKHRRRFHFHEAMLEINEHMHKVWKNQVEEKSLQSNISSWIMNLPFDTKVKEWLAAEERYKHEVQMKNILPAVADKFLVDREMDQRGASILCFDEIQTVDVFAVVALSGIISRLLSTGTVLVATSNRAPNDLNQDGMQKEIFLKLVAKLERHCENVLIGNEIDYRRLIAQRSINKAHYFWPLDGIAFKKFEEMWHEVINQSGGKVISSTILVMFGRTLEVPESCNGVARFKFDYLCGRPVGAADYIAVAKNYHTVFISDIPVMSMRIRDKARRFITLIDELYNHHCCLFCSAASSIDDLFQGTEEGTLFDLESFQFETETEGGKLRRNVLAEGNVGSGGAPAGIISLLSGQEEMFAFRRAVSRLIEMQTPLYLEGVCDLHPYFQIQPQELRDDNARTLQSQTTC* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0516 605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 373 IPR027417 -
Vvi4g0516 605 Coils Coil 64 112 - -
Vvi4g0516 605 Pfam AFG1-like ATPase 161 505 IPR005654 GO:0005524|GO:0016887
Vvi4g0516 605 PANTHER ATPASE N2B 38 589 IPR005654 GO:0005524|GO:0016887
Vvi4g0516 605 FunFam AFG1-like ATPase isoform C 166 367 - -
Vvi4g0516 605 Gene3D - 164 367 IPR027417 -
Vvi4g0516 605 NCBIfam cell division protein ZapE 159 506 IPR005654 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0516 Vvi-Chr4 4762451 4774620 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0516 - - vvi:100266182 1213.36