Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0500 ATGAGCTTCAATAGCTCCACTATGGGTTCTGGTAGTAGAACTACTAGAAGAACATTTGAGTTTGGAAGGACCCATGTGGTCAGGCCCAAAGGGAAGCATCAGGCCACTATAGTTTGGCTACATGGCCTTGGTGACAAAGGTTCAAGCTGGTCCCAGATCTTGGAGACCTTGCCTCTTCCAAATATCAAATGGATTTGCCCAACAGCTCCTACTCGACCTGTAGCATTACTTGGTGGATTTCCATGCACTGCTTGGTTTGATGTAGGAGAGATTTCAGAAGACGCTCCTGATGATTTGGAAGGTTTAGATGCTTCGGCAGCTCATGTTGCAAATCTGTTATCAACAGAGCCTGCCAATATCAAACTCGGTGTTGGAGGCTTCAGTATGGGTGCTGCAGTAGCCGTCTACTCTGCAACATGTCGGGTTTTAGGGCAATATGGGAATGGGAACCCATACCAAGTCACTCTAAGTGCTATTGTTGGACTAAGTGGCTGGCTTCCATGTTCAAGGACCTTGATGAACCAAATGGAACGATCACATGAGGCTGCAAGGCGCGCAGCAACCTTGCCTATTTTGCTCTGTCATGGAATAGGTGATGATGTGGTTGCGTATAAACATGGAGAGAAATCTGCACAGACCTTAAGTGCAGCAGGATTTCGGAATCTTACATTTAGAACCTATAATGGGCTTGGCCACTACACCATCCCTGAAGAGACCGATGAAGTTTGTAATTGGCTAACTGCAAGGTTGATGCTTGACGGGTCCAGGTCGTAA 774 0.4677 MSFNSSTMGSGSRTTRRTFEFGRTHVVRPKGKHQATIVWLHGLGDKGSSWSQILETLPLPNIKWICPTAPTRPVALLGGFPCTAWFDVGEISEDAPDDLEGLDASAAHVANLLSTEPANIKLGVGGFSMGAAVAVYSATCRVLGQYGNGNPYQVTLSAIVGLSGWLPCSRTLMNQMERSHEAARRAATLPILLCHGIGDDVVAYKHGEKSAQTLSAAGFRNLTFRTYNGLGHYTIPEETDEVCNWLTARLMLDGSRS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0500 257 Gene3D alpha/beta hydrolase 15 251 IPR029058 -
Vvi4g0500 257 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Vvi4g0500 257 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 257 - -
Vvi4g0500 257 Pfam Phospholipase/Carboxylesterase 25 246 IPR003140 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0500 Vvi-Chr4 4590126 4594658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0500 1 254 Acyl Lipid Metabolism Gene Families AT5G20060 68.110 1.55e-134 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0500 K06130 - vvi:100259338 510.76