Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0498 ATGGAGGTGTTCATACGCACACGTGCAAACCAAATCCCCACACGTGTGACCCAAAACCCAGTGCATGTTAAAACCGTGAAATCTCGGACCCATGAGTCACGTGTGTTAATACAGAGCGAGACCAACAAAACATTTTCCCTTCCGGAGAAACGAAGAGCAAAAATGTGGAGAAGATTGGTATCATCATCGACGTCAGCTTCCCTTAAAACCCTAGCATCGTCATCGCGCCGATCCTCACTGCCGACACTGGTCCGACCACTCACCTCTGTCTCTTCATCTTCTCCTTCTAATACGACTACTTTTCCTTCCCACAGTCCTATCTCCTCCCCTTCCGATTTTCTCTCAAAGGGGGGAAAGAAGGTTGAAAATGTTATACCCATTGCAACCGGACATGAACGCGAGGAGCTTGAGGGAAGGACACTTCTTGAAGCGAATTATCCAATTGGTCCATTTGGCACTAAGGAAGCACCTGCTATTGTTAAGTCTTTCTACGACAGAAGAATAGTGGGCTGCCCAGGTGGTGAGGGAGAAGATGAGCATGATGTAGTGTGGTTTTGGTTGCACAAAGACCAACCACATGTCTGCCCAGTCTGTTCTCAACATTTCAAGTTGGAAGTAGTTGGCCCTGGTGGATCTCCTTATCACTACTAG 651 0.4762 MEVFIRTRANQIPTRVTQNPVHVKTVKSRTHESRVLIQSETNKTFSLPEKRRAKMWRRLVSSSTSASLKTLASSSRRSSLPTLVRPLTSVSSSSPSNTTTFPSHSPISSPSDFLSKGGKKVENVIPIATGHEREELEGRTLLEANYPIGPFGTKEAPAIVKSFYDRRIVGCPGGEGEDEHDVVWFWLHKDQPHVCPVCSQHFKLEVVGPGGSPYHY* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0498 216 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 55 214 IPR002124 GO:0005740|GO:0005751|GO:0006123
Vvi4g0498 216 CDD Cyt_c_Oxidase_Vb 116 209 IPR002124 GO:0005740|GO:0005751|GO:0006123
Vvi4g0498 216 SUPERFAMILY Rubredoxin-like 119 210 - -
Vvi4g0498 216 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 104 211 IPR002124 GO:0005740|GO:0005751|GO:0006123
Vvi4g0498 216 Pfam Cytochrome c oxidase subunit Vb 124 210 IPR002124 GO:0005740|GO:0005751|GO:0006123
Vvi4g0498 216 Gene3D Cytochrome c oxidase, subunit Vb 118 207 IPR036972 GO:0005740|GO:0005751|GO:0006123
Vvi4g0498 216 FunFam Cytochrome c oxidase subunit Vb 117 207 - -
Vvi4g0498 216 MobiDBLite consensus disorder prediction 82 117 - -
Vvi4g0498 216 MobiDBLite consensus disorder prediction 82 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0498 Vvi-Chr4 4580991 4584770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0498 K02265 - vvi:100244002 374.785