Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0494 ATGGAGAAGGGTTTGTGCAATCCCCAAGGTGAGGATCCATGGCGAGTCCTCGAATTCTACAGTGGCATCGGCGGAATGAGATACTCTTTAAAGAGGGGAGGTGTGAATGCGAAAATTGTCGAAGCATTCGACATCAACAACATTGCCAACGATGTTTATCAACACAATTTCGGTCACCGCCCTTGCCAGGGTAACATCCAGAGCCTTACTGCTGCTGATCTTGATAGATATAGAGCTCATGCATGGCTTCTTTCTCCTCCTTGCCAGCCATACACCCGACAAGGTCTCCAAAAGCACTCTGGCGATGCCCGGGCATTTTCTTTTCTCAAGATTCTTGAACTTATACAGCACACCTTACATCCTCCACTTATGCTTTTTGTTGAGAATGTTGTTGGATTCGAGACATCTGATACACATGAGAAAATGATTGAGATATTATCAAAAACTGGTTTTGTTACCCAGGAATTTATTTTGAGCCCAATACAATTTGGCGTGCCATATTCCAGGCCACGATACTTTTGCCTGGCAAAAAGGAAACCTTTATCATTTGAAAACCAACTCTTCAATAACCAACTACTTTCAACTCCAAGCCCATTATTTGGTCATGAGGATGACTCACTGATTGATGAACATGATCAATCAGAGAAGATCTGGGATAAGTTGCTCCAATCATGTGAGCCAGTGGAGAGATTTCTTGAATTCAAGAATACTATCAACCCATTAGAAACAGAGTCCAGCTACTTGGACACCCTTAGTGTTTCTACAGATGCTTCTGGAGAGTTGGAGAACAATGAAAGAGACAGATCTGACAGTAATTCTTGGGACCAGTTTTCTGTTCCATTGAGCTTGATAGAGAGGTGGGGAAGTGCTATGGATATTGTCTATCCTGACTCAAAGCGTTGCTGCTGTTTTACAAAAAGTTATTATCGGTATGTGAAGGGTACTGGCTCTCTTTTGGCAACTGGCCAGTCAAAGAAGGATAAAGCATCCTTGTTGGAGGAGCAGTGTCTTAGATATTTTACCCCTAGAGAGGTTGCTAATCTGCATTCTTTCCCAGAGGATTTTCACTTTCCACAGCATGTAAACCTTAGACAGCGATACGCATTGCTGGGGAACAGTTTAAGCGTAGCAGTGGTTGCTCCATTACTTACATATCTATTCACTCAACCTTCAGGATTGTAG 1182 0.4281 MEKGLCNPQGEDPWRVLEFYSGIGGMRYSLKRGGVNAKIVEAFDINNIANDVYQHNFGHRPCQGNIQSLTAADLDRYRAHAWLLSPPCQPYTRQGLQKHSGDARAFSFLKILELIQHTLHPPLMLFVENVVGFETSDTHEKMIEILSKTGFVTQEFILSPIQFGVPYSRPRYFCLAKRKPLSFENQLFNNQLLSTPSPLFGHEDDSLIDEHDQSEKIWDKLLQSCEPVERFLEFKNTINPLETESSYLDTLSVSTDASGELENNERDRSDSNSWDQFSVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATGQSKKDKASLLEEQCLRYFTPREVANLHSFPEDFHFPQHVNLRQRYALLGNSLSVAVVAPLLTYLFTQPSGL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0494 393 Pfam C-5 cytosine-specific DNA methylase 15 383 IPR001525 GO:0008168
Vvi4g0494 393 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 386 IPR029063 -
Vvi4g0494 393 PRINTS Cytosine-specific DNA methyltransferase signature 164 177 IPR001525 GO:0008168
Vvi4g0494 393 PRINTS Cytosine-specific DNA methyltransferase signature 121 135 IPR001525 GO:0008168
Vvi4g0494 393 PRINTS Cytosine-specific DNA methyltransferase signature 15 31 IPR001525 GO:0008168
Vvi4g0494 393 ProSiteProfiles C-5 cytosine-specific DNA methylase (Dnmt) domain profile. 14 393 IPR001525 GO:0008168
Vvi4g0494 393 Gene3D DNA Methylase, subunit A, domain 2 259 374 - -
Vvi4g0494 393 NCBIfam DNA (cytosine-5-)-methyltransferase 17 380 IPR001525 GO:0008168
Vvi4g0494 393 Gene3D Vaccinia Virus protein VP39 7 194 IPR029063 -
Vvi4g0494 393 PANTHER TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE 12 389 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0494 K15336 - vvi:109121395 810.831