Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0489 ATGAGAGCTGTGGCGTTTCTTTTGCTACTATTGTGCGCCACCTGCCACATTGCCTTATCCTTCACCGACGGACTATTACCGAATGGGAACTTCGAGCTGGGGCCGAAGCCATCGGACATGAAGGGAACGGAGGTGATAGGCCCGCACGCCATACCGGAATGGGAAACATCGGGTTTCATCGAGTACATAAAAGCAGGACAAAAACAAGGCGACATGTTGCTGGTCGTCCCTGAAGGAGCCTTCGCAGTCAGGCTGGGGAACGAGGCTTCCATAAAACAGAGAGTGAAGGTGATCAAGGGAATGTACTATTCCATTACCTTTAGTGCCGCCAGAACCTGCGCCCAGGAGGAGCGCTTGAACATATCAGTGGCGCCCGACTGGGGAGTCCTGCCTATGCAAACTCTGTACAGCAGCAACGGCTGGGACTCCTACGCCTGGGCGTTCCAGGCTGATTACGATGTGATCGAGATCGTCATACATAACCCAGGCGTAGAGGAGGATCCAGCTTGTGGACCGTTGATCGATTCCGTTGCTTTCAGGGCTCTGTATCCTCCCAGACCTTCCAGCAAGAACCTACTGAAAAATGGTGGGTTTGAAGAGGGCCCATATGTGTTCCCCAACACATCCTGGGGAGTTCTCATCCCACCCAACATTGAAGATGATCACTCTCCGCTCCCTGGTTGGATGGTGGAGTCCCTCAAAGCCGTCAAGTACATCGACTCCGACCACTTCTCCGTGCCGCAGGAGAAACGTGCGGTGGAGCTGGTGGCCGGAAAAGAGAGTGCCATAGCCCAAGTAGCCAGAACCATCCCTGGCAAAACATATGCGCTCTCATTCTCAGTAGGAGATGCCAGCAACTCCTGTGAAGGGTCCATGGTGGTGGAGGCCTTCGCCGGCAGGGACACCATCAAGGTGCCATATGAATCAAAGGGCAAAGGAGGCTTCAAGCGGGCTGTTCTCCGTTTTGTAGCGGTATCCAACCGAACCCGAATCATGTTCCTGAGCACATTCTATACCATGAGGAGTGATGACTATGCCTCCCTCTGTGGACCTGTTCTTGACGATGTGAAGCTGCTCAGCCTCCGCACTCCTCCTAGGCACATCTAA 1107 0.5393 MRAVAFLLLLLCATCHIALSFTDGLLPNGNFELGPKPSDMKGTEVIGPHAIPEWETSGFIEYIKAGQKQGDMLLVVPEGAFAVRLGNEASIKQRVKVIKGMYYSITFSAARTCAQEERLNISVAPDWGVLPMQTLYSSNGWDSYAWAFQADYDVIEIVIHNPGVEEDPACGPLIDSVAFRALYPPRPSSKNLLKNGGFEEGPYVFPNTSWGVLIPPNIEDDHSPLPGWMVESLKAVKYIDSDHFSVPQEKRAVELVAGKESAIAQVARTIPGKTYALSFSVGDASNSCEGSMVVEAFAGRDTIKVPYESKGKGGFKRAVLRFVAVSNRTRIMFLSTFYTMRSDDYASLCGPVLDDVKLLSLRTPPRHI* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0489 368 SUPERFAMILY Galactose-binding domain-like 22 179 IPR008979 -
Vvi4g0489 368 PANTHER OS02G0527500 PROTEIN-RELATED 5 360 - -
Vvi4g0489 368 Pfam Protein of unknown function (DUF642) 24 179 IPR006946 -
Vvi4g0489 368 Pfam Protein of unknown function (DUF642) 191 358 IPR006946 -
Vvi4g0489 368 Gene3D - 187 359 - -
Vvi4g0489 368 FunFam DUF642 family protein 187 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0489 Vvi-Chr4 4513134 4516026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0489 - - vvi:100252479 747.658