Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0480 ATGTTCATGGTCATGAAAACATTGTTTGATCTGCCTGAAGAGACCAAGAAGAAGCACTCCAGCACTAAGCCTTACCACAGCTACCAGGGCAAGTGCCCAATTGTGCCTCTCCTTGAGAGCTTTGGCATCGATGACGCCCCCCAACCCCAGGCTGCTCAGGCCTTCACCAACCTCCTGTGGCCCGAGGGGAATCCGGCCTTCTGTGGAGCCCTCATTTCCATGGCCACAAAGATGCTGGAACTGAACTTCATCGTCCTGAAACTGATCCTGGAGAGCCTTGGCATGGAGAAGTACTACAATTCCCAGAAAGAGAACAGTGCCAGCGTTTTCCGGTTGATGAAGTACACAGTCCCTCCGAGCAATGACTCGGCCATTGGCCTGGTTACACACACAGATAAGAACATCCTCACCATCTTATGTCAAAATGAAGTGCAAGGCCTGGAGGTTCTCTCCAAAGAAGGCAACTGGATTCGACTAAATTTCTGCAAGGATTCCTTCATAGTCATCATAGGTGACTTGTTGAAGTGTAGGCATGGACGAATGGGAGGCTTCATGCAGTGA 561 0.5027 MFMVMKTLFDLPEETKKKHSSTKPYHSYQGKCPIVPLLESFGIDDAPQPQAAQAFTNLLWPEGNPAFCGALISMATKMLELNFIVLKLILESLGMEKYYNSQKENSASVFRLMKYTVPPSNDSAIGLVTHTDKNILTILCQNEVQGLEVLSKEGNWIRLNFCKDSFIVIIGDLLKCRHGRMGGFMQ* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0480 186 SUPERFAMILY Clavaminate synthase-like 1 175 - -
Vvi4g0480 186 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 175 - -
Vvi4g0480 186 Gene3D - 1 180 IPR027443 -
Vvi4g0480 186 Pfam 2OG-Fe(II) oxygenase superfamily 113 174 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0480 Vvi-Chr4 4415921 4417521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0480 61 175 Glycosyltransferase AT5G59530 27.350 2.40e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0480 - - vvi:100267884 350.903