Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0475 ATGTATGGGGAACGGTCTCCTACAACGCAGCAAGTACTCCTTGCTGACATGTCAGCCACAACCTATGATCGTCTCAAACTCCACCTTCCCAAACAGTTTTGTGAACTCCCACTGTATCGCTTCCCTGAAGATTTTCCCAAGTACCCAACAAAGCAGCAGTTCATATCATACATGGAGTCTTATGCTTCCCACTTTTCAATCCACCCCAGGTTCAAGCAACAAGTTCAAAGAGCTTATTTTGATCCAAGCTGCAAGCTATGGAAGGTTCAAACTCAGGATTTTGAGTACATCTCTCGCTGGCTTATTGTTGCCACTGGCGAAAATGCTGAACCTCTAATACCTGAAATTCTGGGCCTTGAGAGGTTCCGTGGACGGGTTGTTCATACCAGTGTGTATAAGTCCGGGTCTGATTTCAGAAACCAGAGGGTTTTGGTTGTTGGTTGCGGCAATTCCGGCATGGAAGTGAGCTTGGACCTCTGTAGATATAATGCCAGCCCTCATATCGTGGTTAGAAACACTGTGCATGTTCTACCTAGAGAGATGTTTGGCTTGTCAACATTTGGAGTAGCCATGGCACTTCTCAAATGGCTTCCACTGAGACTAGTAGACAAGTTCCTCTTACTAGTAGCCAACTTCACCCTGGGCAACACCGACCACTTAGGCCTCCGGAGGCCCAAAACCGGACCAATTGAGCTCAAAAATGCCACCGGAAAAACCCCAGTACTGGATGTAGGAGCCCTCTCGCAGATAAAATCCGGCAAAATCAAGGTGATGGAAGGTGTGAGAGAGATAACAAGAAATGGAGCCAAGTTTCTGGACGGTCAGGAAAAAGAATTCCATTCAATAATCTTAGCAACAGGGTACAAGAGCAATGTTCCAAGTTGGCTAAAGAGTGGCGACTTTTTCACACAAGATGGGGGGATGCCCAAAACGCCATTTCCTAACGGTTGGAAGGGAGGGGATGGATTGTACACAGTTGGGTTTACGAGAAGGGGGCTCCTGGGAACGGCGTCCGACGCAGTCAATATCGCCCGGGACATAGCTGAGCAGTGGAGGACATTTAATGCCACCAACAATATATGTAATACCCATGTTATCCTTAGAAGAAAACCATAG 1116 0.4713 MYGERSPTTQQVLLADMSATTYDRLKLHLPKQFCELPLYRFPEDFPKYPTKQQFISYMESYASHFSIHPRFKQQVQRAYFDPSCKLWKVQTQDFEYISRWLIVATGENAEPLIPEILGLERFRGRVVHTSVYKSGSDFRNQRVLVVGCGNSGMEVSLDLCRYNASPHIVVRNTVHVLPREMFGLSTFGVAMALLKWLPLRLVDKFLLLVANFTLGNTDHLGLRRPKTGPIELKNATGKTPVLDVGALSQIKSGKIKVMEGVREITRNGAKFLDGQEKEFHSIILATGYKSNVPSWLKSGDFFTQDGGMPKTPFPNGWKGGDGLYTVGFTRRGLLGTASDAVNIARDIAEQWRTFNATNNICNTHVILRRKP* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0475 371 Pfam Flavin-binding monooxygenase-like 31 293 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi4g0475 371 Gene3D - 6 355 IPR036188 -
Vvi4g0475 371 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 19 353 - -
Vvi4g0475 371 FunFam Flavin-containing monooxygenase 9 356 - -
Vvi4g0475 371 PRINTS Pyridine nucleotide disulphide reductase class-II signature 99 107 - -
Vvi4g0475 371 PRINTS Pyridine nucleotide disulphide reductase class-II signature 138 162 - -
Vvi4g0475 371 SUPERFAMILY FAD/NAD(P)-binding domain 88 354 IPR036188 -
Vvi4g0475 371 SUPERFAMILY FAD/NAD(P)-binding domain 19 176 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0475 Vvi-Chr4 4330633 4333507 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0475 K11816 - vvi:100249017 723.391