Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0468 ATGGCCGAAATTTCGTACATCTGCAAGCGCACGGTGGTCAGCACAAAACCGGTTCAACCCGGAAAAACACACCCCCTATCGGCCCTCGACCGTGCCATGGACCACAACCGTGTCCGTATTGTTTACTATTACCGAACCCCACCAGGGAGAGAGGTTGGAGAAGTGACCAAGAGGCTCAGAGAGACTATATCCGAAATGCTTACTAGTTTCCCAATGGTGACCGGACGGTTGCAAAGAAACGAAGAAGGACAATGGGTGGTCAAGTGCAATGATGCGGGTGTTAGAATGGTTGAAGCGAGAGCTAAAGGGAGTGTGGGGGAGTGGCTGAAGAGTGTGGATAGGGAGAAGGAGCTTAAGCTTGTTCACTGGGAGGACATGTTCCATAAAATCTACTTCTGGTCCACCTTCTATGTTCAGCTGACTGAATTTGAAGAAGGTGGGCTAGCAATTGGCTTTAGCTGCACCCATCTTCTAGCCGATCCCATTTGCGCAACCATGATTATTAAGGCCTGGGCCGACACCTCGTTACTAGGTGAAATGCCTAATCCCCCTCTCTTTCACTCGTCCTTGCCACTAATTAGGCCAGTCAATAGTATCAACCACAACCCCTACACCCACTTAATCAACCATTACAAATCCTCCCTAGACAACTCAACCCCTGTCACCAACACAAAATACACAACAATAGCCCTACTATTTACAAACCCTATGGTGCAAGCCTGCATGGAAATGGCCAGAACTCATCCTGAAGCCCATGGGACCCCAATATTTCCCTCCCCATTCGAGGCTCTAGCTGGGCTGTTCTGGACTTGTATTAGTAATGTCAAAGGATGGAGAGAAGGGCTTATAAACATGTCTATATGTTTAGATATGAGAAAGGTATTAGGTCTTGATGAAGGGTTCTTTGGCAACTGTATGGTGTACAATGCTGTGCGTGGAGGGGATTTCAATAGACATGAAATATCAAAAGCTGCTATGGCTATACGAGGAGTGATGGAGAAGATGGACAGTGAGGAGATCATGGATTTAATCCAATGGCTGGAGTGTGATAGTAACCGGTCTTCAGTACTGATGGGTGGTTGTGAGCATCTCATTTGTACAAACTTAGAGGATGTGGAACCATATTCAGCCAAGTTTGAAGAAGGGTATGCACCGGTTAGGGTTTCATATCACATCGAGCCAGTATCCACAAAGGGGCAGGTTTTGATCCTTCCGGCGCCACCAGAGGAAGGACCATTGAGCAGGGTCGTAATGGTTACACTTCCAGAGAATGAGGCTGTTAAGCTGTGTAAAGATGTCCGTGTTTTAAGCTTTTCCCCCACTATCTTAATGGGATTCAACAAAAACTAA 1350 0.4689 MAEISYICKRTVVSTKPVQPGKTHPLSALDRAMDHNRVRIVYYYRTPPGREVGEVTKRLRETISEMLTSFPMVTGRLQRNEEGQWVVKCNDAGVRMVEARAKGSVGEWLKSVDREKELKLVHWEDMFHKIYFWSTFYVQLTEFEEGGLAIGFSCTHLLADPICATMIIKAWADTSLLGEMPNPPLFHSSLPLIRPVNSINHNPYTHLINHYKSSLDNSTPVTNTKYTTIALLFTNPMVQACMEMARTHPEAHGTPIFPSPFEALAGLFWTCISNVKGWREGLINMSICLDMRKVLGLDEGFFGNCMVYNAVRGGDFNRHEISKAAMAIRGVMEKMDSEEIMDLIQWLECDSNRSSVLMGGCEHLICTNLEDVEPYSAKFEEGYAPVRVSYHIEPVSTKGQVLILPAPPEEGPLSRVVMVTLPENEAVKLCKDVRVLSFSPTILMGFNKN* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0468 449 Gene3D - 208 431 IPR023213 -
Vvi4g0468 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 427 - -
Vvi4g0468 449 Pfam Transferase family 4 431 - -
Vvi4g0468 449 Gene3D - 2 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0468 Vvi-Chr4 4241393 4244043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0468 11 406 Acyl Lipid Metabolism Gene Families AT3G23840 25.000 1.65e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0468 - - vvi:100245757 926.006