Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi4g0465 | ATGGGTTTCCTACACTTGAAGCATCTGGCAATGCTGGTTGGCATGGTTGATATTTGGTGCTGCACTTACACTCCCATAAACCAAACGCTGGTTGCAGAGGAGCAACTTGATCCATCGAAGTCCTCTCAAGTCGTGGTGCTCCATCCCCACCTTCTTTATGCCAAAATCTCTTCAATTTGCATGGCTGATCACTCTAAACTCCAGAAAAGTGCACCACATCGTGACTTTTACAATGTCAGGAAGGCTGATACACGCATTCATCACTCAACGTGCATGAATCAGAAATTTCTTTTGGGGTTTATCTAG | 306 | 0.4477 | MGFLHLKHLAMLVGMVDIWCCTYTPINQTLVAEEQLDPSKSSQVVVLHPHLLYAKISSICMADHSKLQKSAPHRDFYNVRKADTRIHHSTCMNQKFLLGFI* | 102 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi4g0465 | 101 | SUPERFAMILY | Metallo-dependent hydrolases | 65 | 101 | IPR032466 | - | |
| Vvi4g0465 | 101 | Gene3D | - | 60 | 101 | - | - | |
| Vvi4g0465 | 101 | Pfam | AMP deaminase | 64 | 101 | IPR006329 | GO:0003876|GO:0032264 | |
| Vvi4g0465 | 101 | PANTHER | AMP DEAMINASE | 60 | 101 | IPR006329 | GO:0003876|GO:0032264 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi4g0465 | Vvi-Chr4 | 4206514 | 4208718 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi4g0465 | K01490 | K24242 | vvi:100242328 | 88.5817 |