Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0450 ATGTCGAAGAATGAACACCTCCAATTGGCGGCCTCGCTTCTCATATTTTCATGTCTTCTTCATGTCTGCTCAGGAGATATTGGGACAGCAGGCCAATATGCTCCCCCATATCTGCCAACTGCCTGCTACGGCAACGATGTGTCTAAGTTCCCATCAAGCAACTTATTCGCGTCAGCCGGAGATGGGATATGGGACAATGGAGCAGCGTGCGGCAGGCAGTACTTTGTCAGGTGCTTGAGCGCACAAACTCCGGGGATATGCAAAGCTGGTCAGATCATAAAAGTGAATATTGTGGATAGAGCCTCTAGGAATGGAGTGATGCTTGTTCTTTCTACTATTGCATTTGGGGCTATTGCTAATCCTTCTGCTTCTTTCGTTAACATAGAGTTTGCCGAGTAA 399 0.4737 MSKNEHLQLAASLLIFSCLLHVCSGDIGTAGQYAPPYLPTACYGNDVSKFPSSNLFASAGDGIWDNGAACGRQYFVRCLSAQTPGICKAGQIIKVNIVDRASRNGVMLVLSTIAFGAIANPSASFVNIEFAE* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0450 132 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vvi4g0450 132 Gene3D - 26 132 IPR036908 -
Vvi4g0450 132 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 10 131 - -
Vvi4g0450 132 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 39 132 IPR007112 -
Vvi4g0450 132 CDD DPBB_EG45-like 26 130 - -
Vvi4g0450 132 Pfam Lytic transglycolase 63 129 IPR009009 -
Vvi4g0450 132 SUPERFAMILY Barwin-like endoglucanases 13 130 IPR036908 -
Vvi4g0450 132 Coils Coil 131 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0450 Vvi-Chr4 4066503 4066983 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0450 - - vvi:104879012 270.011