Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0438 ATGCTGAGGAAGAGGAGCAGATCATTTCAGAAAGATCAACACATGGGTCATCCAACAATGGCTGATGCTGTTTCTGAGCTCTATTTTCAGTCTGATGTTATGGGGCAGAAACACAAAGGCAACTCCTTTTTCAGTGTCCCTGGCCTGTTTGTAGGATTGAATTATAAGGGTTTATCAGATTCTGATTCAGTTAGAAGCCCTACCTCTCCTCTAGATTTTAGAGTATTTTCAAATCTAGGCAGCCCATTTAGGTCCCCAAGATCATCCCAAGATGGGCAGCACAAGAGCTGGGATTGCAGTAAAGTAGGTTTAAGCATCATAGATTCTCTTGATGATGGTGGGAAACTATCCGGTAAAGTTCTCGGATCATCGGAGAGTAAGACTATTCTTTTTGGACCTCAGATGAGGATTAAAACCCCTAATTCTCCAAGCCATATCAATTTTTTTGATGGTTCAAAGTCTCTGCCTAAAAACTATGCAAGTTTTCCTCATACCCAGATCAAATCTCGACCCCAGAAGCGGGATTCTGATGTTGTGTTTGAAATTGAAGAAACCCCATTAGAACCCGAGGCATTTGGAAGGATTCGATCTTGTTCGTTGGATTCCAGCAGGTCATTCTCGTCCCTAACTAATTTAACCAAGCGCCAGTCCAATTTGAGTTCTGGGAATTTATGCCCAGGAAATATGACTACCCAAGTTAGTTCACCTCCTCAAATACTTGGAGGAAACCCAAATCCGGACAATTTTTTGCCTATGAAACTGAATTCGATTCCAGCATCGGTTGGCTCTGGCCAAGGATTGATCGGATCTCTCTCAGCAAGTGAAATTGAGCTTTCTGAGGATTATACATGTGTGATTTCTCATGGTCCAAACCCCAAAACAACTCATATTTATGGTGACTGCATTTTGGAATGTCACTCTAATGACTTAGCCAATCATAATAAGAATGATGAACATAAGATAGGTTCTCCCCTGATAGTCGAATGCTCGGATAATTCTACCCCATATCCTTCTAATGACTTCTTGAGCATCTGTTACTCTTGCAAGAAGAAATTGGAAGAGGGAAAAGATATCTACATGTACAGGGGTGAGAAAGCATTTTGCAGTTTGAATTGCCGCTCACAGGAGATTTTGATTGATGAGGAAATGGAGAAGACAACAGATGATTCTTCTGAGAAGTCTCCTGTGTCAAAATGTGGCGAGGATCTTTTTGAAACCGGCATGTTGGCATGCTGA 1236 0.4167 MLRKRSRSFQKDQHMGHPTMADAVSELYFQSDVMGQKHKGNSFFSVPGLFVGLNYKGLSDSDSVRSPTSPLDFRVFSNLGSPFRSPRSSQDGQHKSWDCSKVGLSIIDSLDDGGKLSGKVLGSSESKTILFGPQMRIKTPNSPSHINFFDGSKSLPKNYASFPHTQIKSRPQKRDSDVVFEIEETPLEPEAFGRIRSCSLDSSRSFSSLTNLTKRQSNLSSGNLCPGNMTTQVSSPPQILGGNPNPDNFLPMKLNSIPASVGSGQGLIGSLSASEIELSEDYTCVISHGPNPKTTHIYGDCILECHSNDLANHNKNDEHKIGSPLIVECSDNSTPYPSNDFLSICYSCKKKLEEGKDIYMYRGEKAFCSLNCRSQEILIDEEMEKTTDDSSEKSPVSKCGEDLFETGMLAC* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0438 411 ProSiteProfiles Zinc finger FLZ-type profile. 340 384 IPR007650 -
Vvi4g0438 411 PANTHER FCS-LIKE ZINC FINGER 11 1 409 IPR044585 -
Vvi4g0438 411 Pfam zinc-finger of the FCS-type, C2-C2 331 383 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0438 Vvi-Chr4 3865582 3866915 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0438 - - vvi:100247517 817.764