Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0436 ATGATGAGGGGCTGTCTTTGCCACTTCACAGTAAAACGCTTATACACCCGCCCCTCCCTTGCCCTTATCATCTATAATCAAAGAAAACATGTAGATAAAACAGGGGCTCCATGTCATGGAATACTTGATCGGGATGCTGTGGGAACAAGAGCAATGTATGCTCCTCGGATTTCAGAAGAATTACGCCAGAAAGTGATGTCTATGCTTTATGTTGGAATATCTTTAGACAATATAATCCAGCATCACATGGAGGTGGTGCAGAACCATGGTGGGCCCCACAACCGTGATGATTTTCTCACTCGAAATGATGTTCGTAACATGGAAAGAGTAATCCGTAATTCATCACACATGTTACTTGACAATGATGAATGCAGTGTAAAAGCTTGGATGCAACGCCATCAGAAGCATGTTTTCTTTTTCCAAGCTAACTCTGGTTCAGAACCATTTATTTTGGGGATACAAACAGATTGGCAGCTGCAGCAAATGCTTCATTATGGGCACAATGGTTCAATAGCTTCTCATTCAACATTTGGCAGTAAGAAACTTAAGTATCCTTTGTGTTCTTTACTTGTTTTTGACTCATCCCGGAATGCGATACCAGTTGCTTGGGTCATTACCTCTTCTTCTATTGGTCAAGGCATCCATAAATGGATGGGGATCTTTGTTGAAAGAATCCGAACAAAAGATCCCAGATGGAGACCCAATGCCTTCTTAGTAGATGATCCTTCTATTGAAATTGGTGTTATCAGAGAAGTATTTCAGTGTCGGGTCCTTCTATGTCTCTGGCATGTTCGTCGTGCTTGGATGAGAAGCCTTCTGAAGAAATGCTGTAACTTGGATGTACAACAGGAGATGTTTAAGCACTTAGGTCAGATTCTGTACTGCACAAAAAACAGGCCAATCATTGTGGATGCTATCCAAGAGTTCATGCAAATATTTGTTGACCAATGCGCCTTCATGAATTATTTCAGGAGACGGTGGTTACCAAGGATAGAACTGTGGGTGAATGGAATAAAGACTCTTCCCGTGGCAAGTCAAGAGCCTAATGCTGCAATTGAGTCCTATCATCTAAGCTTGAAAACAAAGCTTTTCAACGAGTTATATGCTAATCACTGGCCAAGAGTTGACTGGTTGATTCACATATTGACAACCGAAATTCACTCTTTTTATTGGCTTGAACAATACATAATAGAGACTGGATACTTTGAAAATCTGAGGGATGTGTCTTTCACAACCAACTCATGGTATCGGGCCCTGCATATCCCAGATGCAGATGTGTTACTGGATGAGCAAAATCTCCAGCTCGCAAAGGTCATTTCTCAAACAGACAGAACCCTGGCATATACAATTTGGAACCCTGGGTCTGAGTTCTGTATCTGTGATTGCCCCTGGTCTAGGCTGGGAAATCTCTGCAAGCATGCCATAAAGGTGGCAATTTTATGTAAAAGTAGGCAGGTCGCAAGGCCGTTATTGTCGGCTCAAGTTTATCGGCAGGCCTTGCTTACCCTTCTGCAGAACCCCCCAGATGATCCCCTGGTCCTTGATCATGCCATTCTTCATGTGACTCGCTTGCAACAAGACATCAAAGGTCTAGAAGAGTTATCCAACAGTGGCCTGCTCCAGCCTTTACCCCCTGAGACAAACTCTCAGATGGTGGATAATATCCCAATTTTTCCTCGTCTGCACTGA 1689 0.4304 MMRGCLCHFTVKRLYTRPSLALIIYNQRKHVDKTGAPCHGILDRDAVGTRAMYAPRISEELRQKVMSMLYVGISLDNIIQHHMEVVQNHGGPHNRDDFLTRNDVRNMERVIRNSSHMLLDNDECSVKAWMQRHQKHVFFFQANSGSEPFILGIQTDWQLQQMLHYGHNGSIASHSTFGSKKLKYPLCSLLVFDSSRNAIPVAWVITSSSIGQGIHKWMGIFVERIRTKDPRWRPNAFLVDDPSIEIGVIREVFQCRVLLCLWHVRRAWMRSLLKKCCNLDVQQEMFKHLGQILYCTKNRPIIVDAIQEFMQIFVDQCAFMNYFRRRWLPRIELWVNGIKTLPVASQEPNAAIESYHLSLKTKLFNELYANHWPRVDWLIHILTTEIHSFYWLEQYIIETGYFENLRDVSFTTNSWYRALHIPDADVLLDEQNLQLAKVISQTDRTLAYTIWNPGSEFCICDCPWSRLGNLCKHAIKVAILCKSRQVARPLLSAQVYRQALLTLLQNPPDDPLVLDHAILHVTRLQQDIKGLEELSNSGLLQPLPPETNSQMVDNIPIFPRLH* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0436 562 ProSiteProfiles Zinc finger SWIM-type profile. 448 482 IPR007527 GO:0008270
Vvi4g0436 562 PANTHER ZINC ION BINDING PROTEIN 2 541 - -
Vvi4g0436 562 Pfam MULE transposase domain 175 265 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0436 Vvi-Chr4 3846986 3849693 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0436 - - vvi:100245761 1169.07