Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0426 ATGGAACATAGCGTAGAAAACTCAGGTGGTAGTGAAATTTCGAAGAAATCGAGATCTTTAGATCTTCAGAGCATATATAGATCTAAGGTTTCACAAGAGGGTGATAATAAGATCTTGAAGCGAAAACATAGTTCAGAAAATGATGGGGAGGTTGAGTCGGGACAGGGGAAGAAGAAAAGTAACAGTAGAAAAGCCGTATCTCTGAGTAGTCTGAAATCCCTTCTTAAAAACAGTCACAAGAGTTTAGATGAAGTGTACGCTGATGGGTTGGGATCGGGCTCAAGTTCAGGTTTGCCTGATTCAAAGAAGAAAGAATTGGGGCTGAGTCAGAAATTGGATGACAATAGTGGGTTAAATAGCATTTCGCGTAATTTGGATAATAATGTTATTCGAATTCCAAAACGCCCACGTGGCTTTGTACGGCGGAGGAGATTTGATGGTAATCACATGTTGCAGCCAGGGAGGTCATCACCAGCTAGTAGTAAAGATGTGTTTGTTGATCAGATAACTAAGTTAAGTGATGATTCGGCCACTCGGGTTGTCCCTTTGAAAATTAAGCGCAAAAAGGGTTTTGATGATTTTAAGGAAAATAGGTCTAGTGGGTCTAGTTCAGCTCCACACTACAAGGAGGGTGATGAGATCAAGGTTGTAGACAATGGCAATTCATCTTTGAGAAAGAGAATGCCACGGAAGAAGCAGGTGAAAAGGAAGAATTTGTCATCAGAAGGTAAAAGTATTGTGAAGGAGGAGGCGGTGCCTTTAGCTGATAATCCTATTAAAAATTGTGATGAAGAGGATGAGGAGAATCTTGAAGAGAATGCAGCAAGGATGCTTTCATCTCGGTTTGATCCAAACTGTACTGGGTTTTCGTCAAATGGCAAAGCTTCAACACCTCAATCAACAAATGGGCTGTCCTTTTTGTTATCTCCTGATCAGGATTGTATGATTCACAGGATGAATTCTCTTGTTGGTTCTGAATCTGCATCTGTTGATACTGCTGGCAGAGTATTACGACCACGAAAACAGCACAAGCAGAAGGGTCTCTCAAGGAAAAGGCGTCATTTCTATGAAATTTTCTCCAGGAACTTGGATGCCTACTGGGTATTGAACCGAAGGATCAAAGTCTTTTGGCCATTGGACCAGAGTTGGTATTTTGGTCTTGTGAAAGACTATGACCCAGAAAGAAAGCTTCATCATGTGAAGTATGATGACCGAGATGAAGAATGGATTGACCTGCGACATGAGAGATTCAAGCTCTTGCTACTTCCTAGTGAGGTTCCTGGTAAGGCTGACAGGAAAAAAATGGAAATGGGAGATAAATGTCCTGATGATGAAAATGAAGAAAGAAAGCACAGAAAAAGAGGAGGAAAGAGAGACTTGCCTATGGAGGATGATAGCTGCATAGGCGGATACATGGACTCAGAACCCATCATCTCATGGTTGGCTCGATCTTCCCGTCGGATCAAGTCTTCCCCTTTTCACGTTATGAAGAAACAGAAAACGTCTTACCCATCTTCAAATGCCGTGCCATCACTGTTATCTGATAATACTGACAGCAATGCACAGGGGTGCCTTGATGGCAGCTCCCTGAAAAGGGATAAAGATAGATTAAATAATTCTGCAATGCCTGATGAATTTACTGATGCTGAAAAAATTGAGAAGTCTGTTCCTGGAAGCACCATTTGCTACAAAGATGAAAAAGTTCCAATTGTTTATTTCAGGAGGCGATTGAAGAGGTTCCAGGGACTGCATTATGTTTCTGAGGTTCACAATGTATGCGGAAGTGCATCTGAGCTGGTTCCTTCACCTGTTCCTGTAATTGATAGGTTGGGGACTTTGGAAGAATTCCTTCTTTCCTTGAGACAGTCTGATCAATTTGCGTTATTGTGGTCCAGTGATGGTGCTGGGTTACTAAAATTATCTATCCCAATGATAAATTCTAGGCATTTCAGATTTGAATTCAGTCTCCCTGCACTTCCAGTTCTCAATTGTGCATTTGGAGCAGAGAACTTTTGGTTGTTTCACACTGTGTTGTTACATCAGTATGGTGTGGTGATGCCTAAGTGGCCAAAGGTTCGTTTGGAGATGCTTTTTGTTGATAATCTTGTTGGGTTGAGGTTTCTCTTGTTTGAAGGTTGCTTGAAGCAGGCTGTGGCCTTTGTTTGTCTGGTCCTGACAATATTCAATCAACCTAATGAACAGGGGAGGTATGTTGACCTGCAATTTCCAGTAACTTCAATCAAGTTCAAGTTGTCTTGCGTTCAAGATCTTCAAAAGCAGCTTGTATTTGCGTTCTATAATTTCTCTAAAGTGAAAGACTCTAAGTGGTTCTACCTAGACTGTAAGCTTAAAAGATATTGTTTGCTCACCAAACAACTACCTTTGTCGGAGTGCACATATGATAACATTATGGCGCTTCAAAGTGGAACAAATCCGTTGTTTCTTACTTCTGCCTGGGGCGAGCCAGCCTCAACTGAGTGTCCGCGGAAGAGGTCTAGGCTGGGTGTTATCCACATGGGGGTCTCCAGAGAGTCCACTTTTGTGAATATGAGCCAGTCATCTTCTAGTTTGGATGTGAATCAAGGAAAACTTCCTCCATTTGCCCTATCCTTTAATGCTGCACCTACTTTTTTCCTGGGCCTCCATCTCAAGCTGCTCATGGAGCACAGAGTTGATAGTACATGCTTGCATGATCACAATCCAACATCCCCAAAGCAAAATCTGGAGAGTCTGACAGAGGATGTTACTTGGTCTGGACAGTTTTCTGGTGCTAACCCTCAGATTGCTAAGCAGGCTCAATCTGCATGCAATGATGATGATCGGATAAATTCCTTCCAGAAATATGAAAACAGCAACCTTAATGTTGCTGGAACCTCTGCCTGTTCTGAAGATACCGGAGAAACTGGAATAGATGCCATTGTCCAATTGCAGGAGCAGCAAGGGTACCATTCAGAGGCAGAACAATGCATTCTATCTCCCCAGCCTTTGCTTCTCAATGGCCATTCTTCTACTGGGAAGTCCAATGTTGGGTGCTATTCCCGTTTGAATGGTATCAATGTTCAAATTCCAACATTTGACCAAGTTGAGAAATCTTTTGATAGGGGAGCAGATATCAGTATCAGCCAACAGTCTGTTGATTTGAGTTGGAATGTGAATGATGGTGTCATTCGTAGCCCAAACCCCACTGCTCCCAGGAGTATGTGGCAAAGGAATAAAAATAGTTTTTCTTCATCGTTTGGATACCCCTCGCATATGTGGTCCGATGGAAAGGGTGACTTTTTCGGCAATGGTTTTGGTAATGGACCTAAGAAACCACGTACCCAGGTCTCATACACACTGCCTGTTGGAGGTTTTGATTTTAGCTCAAAGCAGAGAAGCCATCACCAGAAAGGGCTTCCTAACAAAAGAATCAGGCGGGCTAATGAGAAGAGGTTATCAGATGGTTCTAGAAGCTCTCAACGAAACCTAGAATCATTATCTTGTGAGGCAAATGTATTGATTACATTTGGGGACAGAGGATGGAGAGAATCTGGAGCCCAAGTTATATTAGAGCTTGGTGATCATAATGAATGGAAACTTGCTGTAAAAGTTTCTGGGGCTACAAAGTATTCATACAAGGCACATCAATTTCTGCAGCCCGGGACAGCAAATCGATTCACACATGCTATGATGTGGAAAGGGGGAAAAGATTGGATTTTGGAGTTTCCAGACCGAAACCAGTGGGCGCTTTTTAAGGAAATGCATGAAGAGTGCTACAACCGGAATGTTCGTGCTGCGTCAGTCAAAAACATACCTATTCCTGGTGTTCGCTTCATAGAGGAAATTGATGATAATGGAACTGAAGTACCATTTGTTCGCAATTCTCCTAAGTACTTCCGGCAGATTGAAACTGATGTTGATATGGCTTTGGATCCATCTCGTATCTTATATGACATGGATAGTGATGATGAACATTGGATTTCAAAAATTCAAAATTCTACAGAAGTTAACGAGGGTACCTGGGAAGAGTTCTCTGAGGATATGTTTGAGAAGGTGATGGATATGTTTGAGAAGGCTGCATACGTTCAACAGTGTGATGAGTTCACATTTGATGAATTAGATGAGCTCATGGTTGGATTTGGCCCAACAAAATTAGTCAGAATCATCCACGAGTATTGGCAACGAAAGAGGCAGAAAAAGGGAATGCCATTAATCCGACATCTCCAGCCTCCACTATGGGAAATGTATCAACAACAACTGAAAGAATGGGAGCAAGCAATGATAAAAAACAACACCGTCTCCTCCCATGGATGGCAGGAGAAAGTTGCATCTATTGAGAAACCAGCCATGTTTGCTTTCTGTCTGAAACCACGGGGTTTGGAAGTACTCAACAAGGGGTCAAAACAAAGATCACACAGGAAATTTCCAGTTGCAGGACAAAGCAATGCCAATTTGGGAGATCAGGATGGTTTCCATGCATTTGGAAGAAGATTAAATGGGTATGCTGTTGGAGATGAGAAAGCTATGTTTCCAGGTCATTACCATGAATCCTCAGATGCTTCCCAATTGTTTCAGTCATCAACAAGGGTATTTTCACCACGGGATGCAGGTAGCACAGGCTATTTCTCATTAAGCAGTGATGGATCTGAGTGGAGTCATCACCCTAGACTTCACAGGAACAAAACTATAGGTAAGAGAAATGGGGTTCATGGATGGAACATGGGCTTACCTGAGTGGCCAAGTCAGAAGCATTACCAATTGGAAGTATCACAGCGGCACAATAGTGAGCTGTTGGATGGATCGGATCTTGATGAGTTCAGGTTACGTGATGCATCTGGTGCAGCTCAGCATGCACTTAACATGGCTAAACTGAAGAGAGAAAAAGCTCAGAGATTTCTTTACAGAGCAGATCTGGCCATCCACAAGGCTGTGGTTGCTCTCATGACTGCTGAGGCAATCAAAGCGTCTTCTGAGGACTTAAATGGTGATGGGTAG 4974 0.4262 MEHSVENSGGSEISKKSRSLDLQSIYRSKVSQEGDNKILKRKHSSENDGEVESGQGKKKSNSRKAVSLSSLKSLLKNSHKSLDEVYADGLGSGSSSGLPDSKKKELGLSQKLDDNSGLNSISRNLDNNVIRIPKRPRGFVRRRRFDGNHMLQPGRSSPASSKDVFVDQITKLSDDSATRVVPLKIKRKKGFDDFKENRSSGSSSAPHYKEGDEIKVVDNGNSSLRKRMPRKKQVKRKNLSSEGKSIVKEEAVPLADNPIKNCDEEDEENLEENAARMLSSRFDPNCTGFSSNGKASTPQSTNGLSFLLSPDQDCMIHRMNSLVGSESASVDTAGRVLRPRKQHKQKGLSRKRRHFYEIFSRNLDAYWVLNRRIKVFWPLDQSWYFGLVKDYDPERKLHHVKYDDRDEEWIDLRHERFKLLLLPSEVPGKADRKKMEMGDKCPDDENEERKHRKRGGKRDLPMEDDSCIGGYMDSEPIISWLARSSRRIKSSPFHVMKKQKTSYPSSNAVPSLLSDNTDSNAQGCLDGSSLKRDKDRLNNSAMPDEFTDAEKIEKSVPGSTICYKDEKVPIVYFRRRLKRFQGLHYVSEVHNVCGSASELVPSPVPVIDRLGTLEEFLLSLRQSDQFALLWSSDGAGLLKLSIPMINSRHFRFEFSLPALPVLNCAFGAENFWLFHTVLLHQYGVVMPKWPKVRLEMLFVDNLVGLRFLLFEGCLKQAVAFVCLVLTIFNQPNEQGRYVDLQFPVTSIKFKLSCVQDLQKQLVFAFYNFSKVKDSKWFYLDCKLKRYCLLTKQLPLSECTYDNIMALQSGTNPLFLTSAWGEPASTECPRKRSRLGVIHMGVSRESTFVNMSQSSSSLDVNQGKLPPFALSFNAAPTFFLGLHLKLLMEHRVDSTCLHDHNPTSPKQNLESLTEDVTWSGQFSGANPQIAKQAQSACNDDDRINSFQKYENSNLNVAGTSACSEDTGETGIDAIVQLQEQQGYHSEAEQCILSPQPLLLNGHSSTGKSNVGCYSRLNGINVQIPTFDQVEKSFDRGADISISQQSVDLSWNVNDGVIRSPNPTAPRSMWQRNKNSFSSSFGYPSHMWSDGKGDFFGNGFGNGPKKPRTQVSYTLPVGGFDFSSKQRSHHQKGLPNKRIRRANEKRLSDGSRSSQRNLESLSCEANVLITFGDRGWRESGAQVILELGDHNEWKLAVKVSGATKYSYKAHQFLQPGTANRFTHAMMWKGGKDWILEFPDRNQWALFKEMHEECYNRNVRAASVKNIPIPGVRFIEEIDDNGTEVPFVRNSPKYFRQIETDVDMALDPSRILYDMDSDDEHWISKIQNSTEVNEGTWEEFSEDMFEKVMDMFEKAAYVQQCDEFTFDELDELMVGFGPTKLVRIIHEYWQRKRQKKGMPLIRHLQPPLWEMYQQQLKEWEQAMIKNNTVSSHGWQEKVASIEKPAMFAFCLKPRGLEVLNKGSKQRSHRKFPVAGQSNANLGDQDGFHAFGRRLNGYAVGDEKAMFPGHYHESSDASQLFQSSTRVFSPRDAGSTGYFSLSSDGSEWSHHPRLHRNKTIGKRNGVHGWNMGLPEWPSQKHYQLEVSQRHNSELLDGSDLDEFRLRDASGAAQHALNMAKLKREKAQRFLYRADLAIHKAVVALMTAEAIKASSEDLNGDG* 1658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0426 1657 PANTHER ENHANCER OF POLYCOMB 1091 1654 IPR024943 GO:0006357|GO:0032777|GO:0035267
Vvi4g0426 1657 MobiDBLite consensus disorder prediction 33 59 - -
Vvi4g0426 1657 MobiDBLite consensus disorder prediction 430 468 - -
Vvi4g0426 1657 CDD Tudor_Agenet_AtEML-like 369 419 - -
Vvi4g0426 1657 MobiDBLite consensus disorder prediction 1118 1153 - -
Vvi4g0426 1657 MobiDBLite consensus disorder prediction 193 212 - -
Vvi4g0426 1657 MobiDBLite consensus disorder prediction 7 31 - -
Vvi4g0426 1657 Pfam Enhancer of polycomb-like 1255 1351 IPR019542 -
Vvi4g0426 1657 Gene3D - 370 416 - -
Vvi4g0426 1657 MobiDBLite consensus disorder prediction 430 464 - -
Vvi4g0426 1657 MobiDBLite consensus disorder prediction 1135 1150 - -
Vvi4g0426 1657 MobiDBLite consensus disorder prediction 85 122 - -
Vvi4g0426 1657 MobiDBLite consensus disorder prediction 513 541 - -
Vvi4g0426 1657 MobiDBLite consensus disorder prediction 1 68 - -
Vvi4g0426 1657 SMART TUDOR_7 365 423 IPR002999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0426 Vvi-Chr4 3767960 3777012 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0426 - - vvi:100264575 3288.05