Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0420 ATGGCCACACTCCTCTCTCCCAATCTTCTCATCTTCAGAAACCATACAAGAACTATGGTAAACCAGAAGAAATGTGGATTGCCTGAGAAAATCATTTCATGTTCATGTGTTCCTTCAAGACCCAATTCAAAAATTGGGTTTTACAGAAGGGATTTGATTCTCTTTGGCTTCTCTTCTTCAGCGGCTCTAATCTTCCCTCCTTCAGGATATGGTACAGAAGAAGAATTTAAAATGGCTTCAGTAGTTGATGATATAAATGCTTATTCTTATCTATACCCATTGGAGTTGCCATCTAAGAAGCTTGTGTTCAAATGGGTGGAATCGAGAAAGCCAGAACGCTATTCGTCAGCTGCACCACTGTCTCCTGATGCACGCCTGCGCATTGTGTCTGAGCGTGTTGACATAATCGATAACCTCATCATTTCTGTTACCATAGGTCCCCCCAATTCACAGTTCTTAAAATCGAAGGACAAGGGTACATGGACTGCAAAAGATGTTGCTGACTCTGTTTTAGCTGACAAGGCTGCATTGCGAATCACTTCAAGTCAGCGCATGTCTGAAAGCTCAGTTCTTGATACACATGCTAGTGAAGTCGATGGTGAGCCATACTGGTACTATGAATACCTAATACGCAAATCACCTACAAAATCTGCTCAAGAATCAAACATTTACAGGCACTATGTTGCTTCAACTGCCGAACGAGATGGTTATTTGTACTCTCTGAATGTTTCAACAATCAGCAAGCAGTGGAAAGTAATGGGGCCTTTGTTGGAAAAAGCTGCCTCTTCTTTTCGCCTTCTCCCCCCCACAGAAGACTACGTTCCTCCATACAAGGATCCCTGGAGATTTTGGTGA 855 0.4269 MATLLSPNLLIFRNHTRTMVNQKKCGLPEKIISCSCVPSRPNSKIGFYRRDLILFGFSSSAALIFPPSGYGTEEEFKMASVVDDINAYSYLYPLELPSKKLVFKWVESRKPERYSSAAPLSPDARLRIVSERVDIIDNLIISVTIGPPNSQFLKSKDKGTWTAKDVADSVLADKAALRITSSQRMSESSVLDTHASEVDGEPYWYYEYLIRKSPTKSAQESNIYRHYVASTAERDGYLYSLNVSTISKQWKVMGPLLEKAASSFRLLPPTEDYVPPYKDPWRFW* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0420 284 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 68 266 - -
Vvi4g0420 284 Pfam PsbP 141 265 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vvi4g0420 284 PANTHER - 13 267 - -
Vvi4g0420 284 SUPERFAMILY Mog1p/PsbP-like 80 266 IPR016123 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0420 - - vvi:100252532 574.704