Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0414 ATGGGGTCTCACCCAGAACTCGCCGCTCGTGCTCTCCACACTGATCTTCCAGTCATGGTTAAGATACGGGAGTTGAGCAAGGGTACCAAAGATCTAATGCCGCTGGGTCAGGGGGCGGTCTATTGGCAACCACCCGACCAGGCTCTGGAGAAGGTTAAAGAGAAGGCATGGGAGCCTTCAACAAGCCAGTATGGGACTCACGAAGGTCTGGCAGAGCTTAGGGAGGCATTGATAAAGAAGTTGCGGCATGAGAATGAATTGCACAAGTCTTCAATCATGGTAACAGCAGGTTCAAATCAGGGATTTTTGAATCTTGTGCTTACATTATGTGATGTTAAGGATTCTGTGGTACTGTTTGCACCATACTTCTTCAATGCATACATGTCCTTCCAGATGACCGGCATCACCGGCATATTGATCGGTACCAGCGATCCCGAGACGCTTCTACCGGATGCAGACTGGTTAGAAAGAGTTCTTTCAGAAACTAAACCAGCTCCAAAGCTGGTTTCCATCACAAATCCTGGAAATCCAACAGGAACTTGCATCCCAGACCCTCTCCTCAAGAGAATTTCGGAAATCTGCAGAAGGGCAGGCACTTGGCTGGTGGTAGACAATGCATATGAATACTTTACATACGATGGTTTGAAGCATTCTTGTGTGGAAGGAAACCATGTCGTGAATCTCTTTTCTTTCTCGAAAGCATATGGGATGATGGGGTGGCGAGTTGGATATATAGCTTATCCATCGGAAGTGCAGAGTCTCCGAACGCAGCTCCTCAAGGTTCAGGACAATGTAGCAATCTGTGCTTCAATGATTTCACAGTCCACGGCTCTGGGCTGCTTGGAAGCTGGGCGTGAGTGGGTGAGAAACCAAGTGAAAAGCCTTGTGAGAAACAGAGAGCTTCTTCTGGAGGCTCTGTCACCTATAGGACAGGATGCAGTGAAAGGAGGGGGAGGAGCGATCTACATATGGGCAAAGCTGCCTGAGAAATACCAAGATGACTTTGCGGTTGTGTGCTGGCTTGCGAAGAGGCATGGGGTGGTGCTTCTTCCTGGGAGTGCTTGTGGTTTGGCAGGGTGTGTTCGGGTCACGTATGGAGCGATTAGAGAGGTGGAATGTGAAGTTGCTGCGAAGAGACTGAGGGCCGGGTTGGAGGAACTTATGAGAGATGGCATGGTGGAGTGA 1185 0.4945 MGSHPELAARALHTDLPVMVKIRELSKGTKDLMPLGQGAVYWQPPDQALEKVKEKAWEPSTSQYGTHEGLAELREALIKKLRHENELHKSSIMVTAGSNQGFLNLVLTLCDVKDSVVLFAPYFFNAYMSFQMTGITGILIGTSDPETLLPDADWLERVLSETKPAPKLVSITNPGNPTGTCIPDPLLKRISEICRRAGTWLVVDNAYEYFTYDGLKHSCVEGNHVVNLFSFSKAYGMMGWRVGYIAYPSEVQSLRTQLLKVQDNVAICASMISQSTALGCLEAGREWVRNQVKSLVRNRELLLEALSPIGQDAVKGGGGAIYIWAKLPEKYQDDFAVVCWLAKRHGVVLLPGSACGLAGCVRVTYGAIREVECEVAAKRLRAGLEELMRDGMVE* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0414 394 CDD AAT_like 33 382 - -
Vvi4g0414 394 Pfam Aminotransferase class I and II 31 380 IPR004839 GO:0009058|GO:0030170
Vvi4g0414 394 Gene3D - 12 390 IPR015421 GO:0003824
Vvi4g0414 394 PANTHER ASPARTATE AMINOTRANSFERASE 17 388 - -
Vvi4g0414 394 SUPERFAMILY PLP-dependent transferases 17 386 IPR015424 -
Vvi4g0414 394 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 230 243 IPR004838 GO:0003824|GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0414 Vvi-Chr4 3613756 3623291 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0414 K00837 - vvi:100255998 799.275