Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0413 ATGGCTGCCCTGAATTTCACCGCCATATCCCTCCGGCCGCCGGAAAAATCATACGTAACTGGAAACCACCGAAACCCTATTTCTTTTCTTCCAGGAAGGAGACCCATGAAAATAGCTGCGGCAGCGAATTCTGTTGAATCTTCGCCGACTGTGCCGGAAAAGCCTGAAATCGAGCTCGAATTCATAGGGGAGAAGCCAGGTAGCGATGGGTCATTCCCAGTGGAGAGGGCGAAGGCAGTGAGTGGAGAGAAGCTTCTGAGGAACATCATGTTGGATAACAAGATAGAGCTCTACGCCCCGTACGGGAAGTTGATGAACTGCGGGGGCGGTGGAAGCTGCGGAACTTGCATTGTTGAGATTATTGATGGAAAAGATCTTCTGAACGAGAGAACAAACACAGAGCTCCGTTATCTGAAGAAGAAACCTGAATCTTGGAGGCTTGCTTGCCAAACTATTGTTGGAAATAAAGAGAACTCTGGCAAGGTTGTAGTTCAGAGACTGCCCCAGTGGAAGAAGTGA 519 0.4913 MAALNFTAISLRPPEKSYVTGNHRNPISFLPGRRPMKIAAAANSVESSPTVPEKPEIELEFIGEKPGSDGSFPVERAKAVSGEKLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVVVQRLPQWKK* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0413 172 Gene3D - 72 171 IPR012675 -
Vvi4g0413 172 SUPERFAMILY 2Fe-2S ferredoxin-like 77 155 IPR036010 GO:0051536
Vvi4g0413 172 Pfam 2Fe-2S iron-sulfur cluster binding domain 103 153 IPR001041 GO:0051536
Vvi4g0413 172 PANTHER FERREDOXIN/ADRENODOXIN 39 169 IPR001055 GO:0051537|GO:0140647
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0413 Vvi-Chr4 3609254 3613034 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0413 - - vvi:100250753 351.288