Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0407 ATGGGGTGTGCGCAATCGAGAATTGAGAATGAGGAGGCGGTTTCGAGATGCAAAGAGCGGAAGATACTCATGAAAGAGGCGCTGGCGGCTCGCAACGCCTTCGCTGCGGGGCACACTGGTTACACCATGGCCTTGAAGAATACCGGCGCCGCGTTGAACGACTACGGCGAAGGAGAAGCCGAGAATAACCACGACCAGCATCTCCATTCGGCATTTGGAACGGTCTCTGAAGCGGCGGCGATCGATGCCACCCTCCCGCCGCCGCCTCCGCCTCTTCCCAACTACTCACCGAGCCCGCTCAAGCGCGCGGTGAGCATGCCGGAGCTTTCGCCGGTGAAAACGCCCGTTGGGTTGAGTATTCCGAAGGTTATTGAAGAAGATGAGCGGGATGATAAGGATGAGCTGATGCGGCGGCGAAATGGCGGTGGAGCGAGGGAGGAGGAGCCCACTCCTCCGCGGACGCCGGCGATGAATGCGGTTCCGCCGCCGCCTCCGGATGCGAAGGGGATGTCTTGGGATTACTTCTTTATGGTGGAGAACATGGCTGGAACCATGCTGACTGAAGAGGATGAGATTAAAGGTGAGAAGAACGAGGATGAGGGTGAGGTATTTCACGAAATGGGCAATGTGGGTGGCGATGGTGGTGAGGAGAGTGGTGGGGTTGAGCCGAAGACACCGCAGAAGACAGCCGAGAAGGAGGATGAGGAGCTTGTGAAGAAGGCAAAGCAGCTCACACATGCCAATACGGCACCGTTGCCGGAGGTCAGGAGGGGGGTGATTGAGCCTAGTATTAATCTTATGCAGATACTGAATGTGATCGACGATCATTTTCTGAAGGCGTCCGAGAGTGCCCAAGAGGTTACCAAGATGCTAGAGGCAAATCGGATGCATTATCACTCTAATTTTGCAGATAATGGCGGACATATTGACCATTCTGCCAGGGTCATGCGCGTTATTACATGGAATAAGTCAATCAGAGGTATGCACAATGCTGATGATAAGAAGGATGTTTTTGATGCAGAAGAATATGAAACTCACGCAACTGTCCTGGACAAGTTGCTGGCATGGGAAAAAAAACTTTATGATGAAGTGAAGGCAGGTGAGCTTATGAAGCATGAGTATCAGAGGAAGGTTGCTTTGCTTAACAAGCAGAAGAAACGCAGTGCCAGTACTGAATCATTGGAGAAAACGAAAGCAGCTGTAAGTCATCTGCATACGCGATATATAGTTGACATGCAGTCCATGGATTCGACTGTTTCTGAAGTAAATCACATCCGTGATGATCAATTGTACCCAAAACTTGTTGCTCTTGTGGACGGGATGGCGAAAATGTGGAATGACATGTGCATGCAGCACAATAGCCAGCTAAAGATGGTTACAGACCTCAAATCTATTGACATCTCCCAGGCTCCCAAGGAGACGAGCAAGCATCACCATGAACGCACCATCCAGCTCTGGAATGAGATCCAAGGATGGCATTCACAGTTTGAAAAGCTTGTGACCCATGAAAAACAATACATCCAGGCACTCAACAGCTGGTTGAAGTTAAATCTAATTCCCATTGAAAGCAGCTTGAAGGAGAAAATCTCATCTCCTCCGAGACCTCAACACCCTCCCATCCAGGCCCTCCTTCACTCATGGCATGACTCTCTGGAGAAGCTTCCTCATGAGCTTGCCAAATCAGCAATCTCCTCCTTTGCTGCTGTGATAAAAACCATCATCCTTCATCAGGAGGAAGAGATGAAACTAAAAGAGAAGTGCGAGGAGACCCAAAAGGAGTATTCGCGCAAGCATCAAGCATTTCAGGACTGGTACCAGAAATACATGCAGCGTAGGACCCCGCCAGATGAAACAGACCCTGAGAAGGGCGACGAAGCCAATCCCAAGGACCCCATCTCAGAGAAACAATTTGTGGTGGAGAGCTTGAAGAAGAAGTTGGAAGAGGAAGTTGAAGCTCACCAAAGACATTGTGTTCAGGTGAGGGAGAAATCACTGGGAAGTCTCAAACTTCGGTTGCCTGAGCTCTTCCGGGCCTTGACAGATTACACTCATGCCTGTTCTGATGCCTATCAAAGACTGAAGGCCATCACTCAATCACAAAGCGTAAATGGTGTTTCTTCTTAA 2124 0.5005 MGCAQSRIENEEAVSRCKERKILMKEALAARNAFAAGHTGYTMALKNTGAALNDYGEGEAENNHDQHLHSAFGTVSEAAAIDATLPPPPPPLPNYSPSPLKRAVSMPELSPVKTPVGLSIPKVIEEDERDDKDELMRRRNGGGAREEEPTPPRTPAMNAVPPPPPDAKGMSWDYFFMVENMAGTMLTEEDEIKGEKNEDEGEVFHEMGNVGGDGGEESGGVEPKTPQKTAEKEDEELVKKAKQLTHANTAPLPEVRRGVIEPSINLMQILNVIDDHFLKASESAQEVTKMLEANRMHYHSNFADNGGHIDHSARVMRVITWNKSIRGMHNADDKKDVFDAEEYETHATVLDKLLAWEKKLYDEVKAGELMKHEYQRKVALLNKQKKRSASTESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDDQLYPKLVALVDGMAKMWNDMCMQHNSQLKMVTDLKSIDISQAPKETSKHHHERTIQLWNEIQGWHSQFEKLVTHEKQYIQALNSWLKLNLIPIESSLKEKISSPPRPQHPPIQALLHSWHDSLEKLPHELAKSAISSFAAVIKTIILHQEEEMKLKEKCEETQKEYSRKHQAFQDWYQKYMQRRTPPDETDPEKGDEANPKDPISEKQFVVESLKKKLEEEVEAHQRHCVQVREKSLGSLKLRLPELFRALTDYTHACSDAYQRLKAITQSQSVNGVSS* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0407 707 PANTHER UNCHARACTERIZED 1 698 - -
Vvi4g0407 707 MobiDBLite consensus disorder prediction 123 166 - -
Vvi4g0407 707 MobiDBLite consensus disorder prediction 192 206 - -
Vvi4g0407 707 MobiDBLite consensus disorder prediction 123 146 - -
Vvi4g0407 707 Coils Coil 643 663 - -
Vvi4g0407 707 MobiDBLite consensus disorder prediction 612 634 - -
Vvi4g0407 707 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vvi4g0407 707 MobiDBLite consensus disorder prediction 192 237 - -
Vvi4g0407 707 Coils Coil 573 593 - -
Vvi4g0407 707 Pfam Protein of unknown function (DUF632) 266 571 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0407 Vvi-Chr4 3540859 3545391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0407 1 60 Acyl Lipid Metabolism Gene Families AT2G27090 41.667 7.22e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0407 - - vvi:100259547 1355.12