Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0406 ATGAATCTTGGTTCTTACATTTTTTTCATTTTGACTTGCTCACAGGATAGAAGCAGATGGTTTAGGGGACTTCCTTGGGAAGAAAGAATGCAGACTGCCCATCAGCAAGGAACACTTGTCCTACTGCAAAATTTGGATCCAGCATACACCTCAGCAGAAGTGGAGGATATTGTCTGGCATGGCTTTAAGGAATCTTGTACAGCAAGGATGATACAACACACGGCAATTTCTAGCCCACATTCTGGTCAAGCTTTTGTTATTTTCAAAACAAGAGATGCAGCAGTGTCGGCTATTAGAAAATTAGAAGAAGGATGCTTACTTCTATCAAATGGGAGGCCTCTTGTTGGCAGCTTTGGAACTCCTTGCTTCCCAGGGAAGCAGTCCACATTTGTTGGTCATCTCTCTATCGATAAGGTTAAAGTCCAAATGCAACGGGAGATGAAGCAAGCTGTATCCACTTCACACTGTTCACAGCCTAACACAATTGAATATGAGATGGCCATGGATTGGTGCTTACAACAAGAAAGATCAGATAGCTGTTGGAAAAAGTTGTATAAGAGACAAGGGGATGAGTTGAGAAAGCTCAAAGCTAGTTTGAAATCCAAATAA 609 0.4171 MNLGSYIFFILTCSQDRSRWFRGLPWEERMQTAHQQGTLVLLQNLDPAYTSAEVEDIVWHGFKESCTARMIQHTAISSPHSGQAFVIFKTRDAAVSAIRKLEEGCLLLSNGRPLVGSFGTPCFPGKQSTFVGHLSIDKVKVQMQREMKQAVSTSHCSQPNTIEYEMAMDWCLQQERSDSCWKKLYKRQGDELRKLKASLKSK* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0406 202 CDD RRM_SF 40 114 - -
Vvi4g0406 202 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 121 IPR000504 GO:0003723
Vvi4g0406 202 FunFam - 26 120 - -
Vvi4g0406 202 SUPERFAMILY RNA-binding domain, RBD 34 113 IPR035979 GO:0003676
Vvi4g0406 202 Gene3D - 26 120 IPR012677 -
Vvi4g0406 202 PANTHER PROTEIN ANTI-SILENCING 1 15 202 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0406 - - vvi:100852811 387.111