Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0405 ATGACTCATTTGACAGAAGTGGACAAAGTGGAGGACTGTGATTTTAAGTGGGGCAAAAAAAGAGGTGTTGGTGGAAAAAGGAAAGAGGTCCAATTTTATGAGTCTTTTACTTATAATGGTGTTGAATATTCCCTGTATGACTGTGTTTATCTTTATAAGGAAGGTGAACCTGAGCCTTATATAGGCAAACTTATAAAGATATGGGAATATCCAGATAAGGAAAAGAAAATAAAGGTTCTATGGTTCTTCCACCCTAGTGAGATTTTGAAATGGCTTGGAGATGGCGAGACAATCAAGAATGAGTTATTTTTGGCCTCTGGTGAAGGTGTTGGTCTAGCAAATGTTAATCCTCTGGAAGCGATTGCTGGCAAGTGTAATGTTGTTTGTATCTCGAAGGACAGTCGAAATCCACAACCCTCAAATGAAGAACTTCAAATGGCTGACCATGTATTTTACCGTACATTTGATGTTGGAAATTGTACAATATTAGATAAGATCGATGACAAAATTGCTGGGGTTGAAGTTGAGTTTATATTTAACCGAAGGGTGTGTCAGAATTCTAATGAGGTTCCAAAAATGGATTCAAATCGGAAAGAAGATATCGGGAGAGTTGTAGCAAGTAGTGAAACACTTCAACTTCCTGAGCAAAACTCATCTGGAGAAGACAAAGATCTAAAGATAGATGGAAATTCTAAGGATGCTTTGGCAAATGAAAATGTTGATGTGAAGGTTTCATTGGTTGAACATAAATCTTCACTTGGAGGAAAGCATGCTTCCGATGCTGATATGGTTTTGGATAACATGACTAATATTAGTGTTGAACGGGAAAATATTGTTGGTGATGGTTCCAAATTGCAGGTTGATTCTGTTAAATATGATGATAAAGTGGGTAAAGTTCTTGTCAATCAAGTTGAAGTTGAGGAAAAAGTAAAATCTACCAGGGATTCTGGTTTATTGGATAGTAGGCCTTCTAAGAGAGCAAAGGTCAGTAGTTCCACTGAACTATCCGAGGATAGGAACAACCGTAGTTTGCAAAAGTCAAATATTGATTCTCATGTGAAAGAAATGAAAGCTTCAGTATCAACTGTCACTACCACTAAAGATAAAACAAAATTAGATCTTGTTAAGGATTCTCCCTCACTGGAGAAGGAAGCATCCAAGAAACTAAAGTCATATGAGAAGATGACGAAACTTTCCAATGGCAATTTGATTAAAGCATTTGCTAGACGGTCTCCAAGCGTGGACACCAAAATTGAGGGCCAAATAATGGAGGTCACCCGAAGACCTAATGCTGTAAGTTGTGTTGTTAGCATTTTGAAAAATATTATTCTTTTCCAAGATCAAAATTTTTAA 1353 0.3695 MTHLTEVDKVEDCDFKWGKKRGVGGKRKEVQFYESFTYNGVEYSLYDCVYLYKEGEPEPYIGKLIKIWEYPDKEKKIKVLWFFHPSEILKWLGDGETIKNELFLASGEGVGLANVNPLEAIAGKCNVVCISKDSRNPQPSNEELQMADHVFYRTFDVGNCTILDKIDDKIAGVEVEFIFNRRVCQNSNEVPKMDSNRKEDIGRVVASSETLQLPEQNSSGEDKDLKIDGNSKDALANENVDVKVSLVEHKSSLGGKHASDADMVLDNMTNISVERENIVGDGSKLQVDSVKYDDKVGKVLVNQVEVEEKVKSTRDSGLLDSRPSKRAKVSSSTELSEDRNNRSLQKSNIDSHVKEMKASVSTVTTTKDKTKLDLVKDSPSLEKEASKKLKSYEKMTKLSNGNLIKAFARRSPSVDTKIEGQIMEVTRRPNAVSCVVSILKNIILFQDQNF* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0405 450 Gene3D - 11 164 IPR043151 -
Vvi4g0405 450 MobiDBLite consensus disorder prediction 206 227 - -
Vvi4g0405 450 Pfam BAH domain 42 152 IPR001025 GO:0003682
Vvi4g0405 450 MobiDBLite consensus disorder prediction 331 346 - -
Vvi4g0405 450 FunFam Bromo-adjacent homology (BAH) domain-containing protein 11 162 - -
Vvi4g0405 450 ProSiteProfiles BAH domain profile. 41 166 IPR001025 GO:0003682
Vvi4g0405 450 MobiDBLite consensus disorder prediction 310 346 - -
Vvi4g0405 450 PANTHER PROTEIN ANTI-SILENCING 1 4 431 - -
Vvi4g0405 450 SMART BAH_4 41 167 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0405 Vvi-Chr4 3517595 3521784 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0405 - - vvi:100852811 822.002