Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0404 ATGGACTTGGCCCCTACTGAAAAAGTGGTTTTAGGCTCAATAGCCTTTGCAATCTTCTGGGTTTTGGCAGTGTTCCCAGCAGTTCCTTTTCTACCCATTGGTAGGACTGCAGGGTCTCTCCTAGGAGCCATGCTCATGGTCATCTTCAGGGTCATAACCCCAGATGAAGCATATGATGCCATTGACCTCTCAATCCTTGGCCTTCTTTTTGGAACTATGGTCGTGAGCGTCTATCTTGAACAAGCTGATATGTTCAAATACTTGGGTGTACTGCTTTCATGGAAGAGTAAGGGTGCAAAGGATTTGCTTTGCCGGATATGTGTAGTTTCTGCCATTTCAAGTGCACTCTTCACCAATGACACCAGTTGTGTTGTGCTGACAGAGTTTGTTCTGAAAATAGCTAGGCAGAATAATGTCCCTCCCGGTCCCTTCTTAGTGGCCTTGGCCTCGAGCGCAAATATTGGATCTTCTGCAACTTCAATTGGTAATCCCCAAAACTTGGTCATTGCCATCAAGAGTAGCCTCTCTTTTGGGGAATTCTTGTTGGGACTCCTCCCTGCAATGCTGGTGGGTGTTTTCGTCAATGCTTTGATCCTTCTATGCATGTATTGGAGACTGCTGTCTATTGAAAAGGATGAAGAACATACTTTGGATGAAGTGATTTCCGAGGAAGATTCGGCTTCCCACCGCTTCTCACCTGCAGCCATGTCAAATCCCACAGCTTCAAATTCTCAAGAATTGAATCCTGTGTTGGAACCAATGATTACCTGGAGCTCCTCAAGTTCAAATGGGAGCACAATCCATACTGAGACTCTTAGAAATAGAGTAAGTTCAAAACAGAGCAATTTGCAGGGGACTTTGAGTGGTAACATTGAGTTAACAAGGAATTCAAGTGCTTACGAAGAGGGGGTGGGTGGTGATGATTTCCCTGAACCGAGGGAGGAAGATTTTTATTATAGAAGACTTGAGGGAGACCCTGTCCCAATGCAGCCTCTGGAAGAAAATGAAAGGTCGGCCAAGCCATGGAAAAGACAGCTATGGAAAACACGTGTTTACCTTGTTACAATTGGCATGCTGATAGCATTGCTTGTTGGTCTAAACATGTCATGGACAACCCTTACTACAGCACTTGCTCTTGTGGTTCTCGACTTCAAGGATGCTCAGCCATGCCTACAAAAGGTTTCATATTCTCTCTTAATCTTCTTTTGTGGCATGTTCATCACAGTGGATGGCTTTAACAGTACAGGAATACCTAGCACTCTCTGGAACCTAACCGAGCCTTATGCACGAATCAATCATGTTGGAGGGATCGTAGTTCTTACCTTAGTCATTCTTGTCCTCTCAAATGTTGCTTCAAATGTGCCTACTGTTATTTTGCTTGGAGCAAGAGTGGCAGCATCAGCAGCAATGATATCTAAGGGCCAAGAGAAAAGGGCATGGTTGATCTTAGCATGGGTGAGCACGGTTGCTGGAAACCTTTCGCTGATGGGGTCAGCTGCAAACCTGATAGTGTGCGAGCAGGCTCGTCGTTCTCGGTTCTATGGCTACACTCTCTCTTTCTGGAGCCACCTCAAGTTTGGTGTTCCTTCAACTCTCATAGTCACAGCCATTGGCCTACTCCTCATAAGGGGTTGA 1635 0.4557 MDLAPTEKVVLGSIAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVIFRVITPDEAYDAIDLSILGLLFGTMVVSVYLEQADMFKYLGVLLSWKSKGAKDLLCRICVVSAISSALFTNDTSCVVLTEFVLKIARQNNVPPGPFLVALASSANIGSSATSIGNPQNLVIAIKSSLSFGEFLLGLLPAMLVGVFVNALILLCMYWRLLSIEKDEEHTLDEVISEEDSASHRFSPAAMSNPTASNSQELNPVLEPMITWSSSSSNGSTIHTETLRNRVSSKQSNLQGTLSGNIELTRNSSAYEEGVGGDDFPEPREEDFYYRRLEGDPVPMQPLEENERSAKPWKRQLWKTRVYLVTIGMLIALLVGLNMSWTTLTTALALVVLDFKDAQPCLQKVSYSLLIFFCGMFITVDGFNSTGIPSTLWNLTEPYARINHVGGIVVLTLVILVLSNVASNVPTVILLGARVAASAAMISKGQEKRAWLILAWVSTVAGNLSLMGSAANLIVCEQARRSRFYGYTLSFWSHLKFGVPSTLIVTAIGLLLIRG* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0404 544 PANTHER TRANSPORTER ARSB-RELATED 1 542 - -
Vvi4g0404 544 CDD YbiR_permease 28 542 - -
Vvi4g0404 544 Pfam Citrate transporter 27 490 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0404 Vvi-Chr4 3504501 3511900 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0404 - - vvi:100243964 1039.25