Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0402 ATGGAGTTTTACCTCCTTCCCATTCTGGCTTTTCTCTCTCTTGTGGTGGTGGAAAGCCGTGCTTCTCTGCGATCTGAGCTTTACTGGCCCTTGGTGTTGCCAAACACTCCCAAGCCAAAGTTTTGTGGGTTTTCTGGAGGCCTGTTGCAGCTAACTCTAACAGCCGGTGATGCTGATCTACCTTCTGAAGTTTACTGGAGTTCTGTGCTTCCAAACACCCCGATGCCACAAGCTGTCAAGAATAGTCTACGTCCAGACCTGCTGGAAGACCAAAGCACCCCTGTAGAGATAGGGAAAGGCACTAGTATGGGTTTCAGCAAAGAAGGAGGAGCTATGAACATGTATGCTGGAGTTAAGCCAGCGAAAGCAGCGATGCCCTTCTCATACCATTATGCTGCTACAAAGGATCAGCTCCATGCCTACCCTAATGTGGCCATTTTCTTCTTGGAGAAGGACATGCATCCCGGCATGAAGCTGACCTTGCACTTCACCAAGACTACAAATGCTACTTTCTTACCTCACCAAGTAGCTAATTCATTACCCTTCTCTTCAGACAAGTTGGCTGAAATTCTGGACCAGTTGTCCATAAAACCAGAATCAGTAGAAGCTGAGACAATCAAGAATACGATTGAAGAGTGTGAGGACCCTGGAATTAAAGGGGAGGAAAAGTATTGTGCAACCTCATTAGAATCCATGATTGATTTCAGCACCTCGAAGCTGGGGAATAAGGGTGTCAAGGCCGTTTCAACAGAGGCAGAAAACAAGTCCCAGATGAAGTACAGAATTGCAGCTGGTTTGGAGAAGATGGGAGGCGACTTCTCTGTGGTGTGCCATAAAATGAATTACCCATATGCAGTGTTTTACTGTCATAAGATCCAGGCCACAAGGGCTTATATGGTTCCCTTGGTGGGCAGGGATGGGACAAAAGCAAAAGCAGTTGCAGTGTGTCATGCAAATACAATGGAATGGAACCCCAATCATTTGGCCTTTCAACTGCTCAAAGTCAAGCCGGGAACTGCTCCCATCTGCCACTTCCTTCCTGAGGACCATGTCGTCTGGGTTGCAAAGTAG 1071 0.4725 MEFYLLPILAFLSLVVVESRASLRSELYWPLVLPNTPKPKFCGFSGGLLQLTLTAGDADLPSEVYWSSVLPNTPMPQAVKNSLRPDLLEDQSTPVEIGKGTSMGFSKEGGAMNMYAGVKPAKAAMPFSYHYAATKDQLHAYPNVAIFFLEKDMHPGMKLTLHFTKTTNATFLPHQVANSLPFSSDKLAEILDQLSIKPESVEAETIKNTIEECEDPGIKGEEKYCATSLESMIDFSTSKLGNKGVKAVSTEAENKSQMKYRIAAGLEKMGGDFSVVCHKMNYPYAVFYCHKIQATRAYMVPLVGRDGTKAKAVAVCHANTMEWNPNHLAFQLLKVKPGTAPICHFLPEDHVVWVAK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0402 356 Pfam BURP domain 146 354 IPR004873 -
Vvi4g0402 356 SMART BURP_2 145 356 IPR004873 -
Vvi4g0402 356 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 62 355 IPR044816 -
Vvi4g0402 356 ProSiteProfiles BURP domain profile. 147 356 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0402 Vvi-Chr4 3481498 3483144 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0402 - - vvi:100249127 726.857