Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0401 ATGGACGGAGTTGGCAACATGCATCTTCATCTTTTTTATTTTAAGTCATCGTATATATTTGCTAATGCTAGCTTATTTCTTCTTGCAACTGAATTATGGCCGCTTGTGGTGGTGGAAAGCCATGCTTCTCTGCGATCTGAGCTTTACTGGCCCTTGCTAACGCTAACAGCGGGTGATTCCGATCTACCTTCTGAAATTTACTGGAATTCCGTGCTTCCAAACACTCCGATGCCTCAAGCTGTGAAGAATAGCCTACGCCCAGGGACTGATATAGGCGTCAGCAAAGGAGGAGTGTCTGTGAGCACAGGCCACGAGGAAAAGCCTGGGTATGTTGGAGTAACGAAAGCGAAAAAACCTATTTTCTTTTACAGGTATGCTGCTACTGAAGATCAACTTCATGCTCATCCAAGCGTGGCTCTATTCTTCTTGGAAAAGGACATGCGTCTTGGCACAAAGATGAACTTGGACTTCATGAAAAATACAAACGAAGCCACCTTCTTACCTCACCAAGTTGCCACTTCAATACCCTTCTCATCAGACAAGTTGCCCGAAATTTTGGACCAATTATCTGTGAAACCAGAATCAGTAGAAGCTGAGACAATCAAGAATACTATTATAGATTGTGATAGACCTGGAATTAAAGGAGAGGAAAAGTATTGTGCAACCTCATTAGAATCCATGATTGATTTCAGCACCTCAAAGCTGGGGAATAAGGGTGTTAAGGCAGTTTCCACAGAGGTAGAAAACAAGTCCCAGACGCTGTACAGAATTGCAGCTGGTGTGGAGAAGATGGGAGGTGACGTTTCTGTGGTGTGCCATAAAATGGAGTATGCATATGCAGTGTTTTACTGTCACAAGATCGCTGCCACAAGGGCTTATATGGTTCCCCTGGTGGGCAGGGATGGGGCAAAAGCGAAAGCAGTTGCATTGTGTCACACAAATACAAAGGAATGGAACCCCAAGCATTTGGCCTTTCAACTGCTCAAAGTCAAGCCAGGAGTTCCCATCTGCCATTTCCTTACTCAGGATCAGATCATCTGGGTGGTTTCAAAATAG 1056 0.4451 MDGVGNMHLHLFYFKSSYIFANASLFLLATELWPLVVVESHASLRSELYWPLLTLTAGDSDLPSEIYWNSVLPNTPMPQAVKNSLRPGTDIGVSKGGVSVSTGHEEKPGYVGVTKAKKPIFFYRYAATEDQLHAHPSVALFFLEKDMRLGTKMNLDFMKNTNEATFLPHQVATSIPFSSDKLPEILDQLSVKPESVEAETIKNTIIDCDRPGIKGEEKYCATSLESMIDFSTSKLGNKGVKAVSTEVENKSQTLYRIAAGVEKMGGDVSVVCHKMEYAYAVFYCHKIAATRAYMVPLVGRDGAKAKAVALCHTNTKEWNPKHLAFQLLKVKPGVPICHFLTQDQIIWVVSK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0401 351 Pfam BURP domain 140 348 IPR004873 -
Vvi4g0401 351 ProSiteProfiles BURP domain profile. 141 350 IPR004873 -
Vvi4g0401 351 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 62 348 IPR044816 -
Vvi4g0401 351 SMART BURP_2 139 350 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0401 Vvi-Chr4 3478347 3480004 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0401 - - vvi:100252668 541.962