Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0399 ATGCAATACGAGAGGGTCTATGGAAATCCTCAAAAAGCAGGCGGAAGTTCTGTAAGCGCGGGCAAAAATAGTCCAAACATGCAACAAGGACACCAAGATGGTACCAGTACAGGTAATGTGTTCTTGGAAAAAGACCTGCATCCTGGGACTAAAATGATGGTGCGCTTCACAAAAACCTCAAGTGCAGCTCATTTCTTGCCCCAGCAAGTTGCTGAATCCATACCTTTTTCATCAAACAAGCTACCAGAAATTTTGAATCAGTTCTCAGTGAAAGAAAACTCCGCAGAAGCCAAGATAATACAGAAAACAATAGAAGAATGTGAGAAACCGGCTATAGAAGGAGAAGAGAAGTACTGTGCGAGATCGTTGGAGTCCCTAATCGATTTCAGCACTTCAAAGCTTGGAAAAAACATTCGAGCACTCCCAAATGTGGTGGAAGGGGAAATCCAGGAATATAAATTTGGAGAGGGAGCGAAGATGCTTGGAGAGAAATCAGTGGTGTGCCACCAGCTGAACTATCCATATGCTGTGGCTCTTTGCCATGCATTTCACATGACAAAAATTTACAAGGTTCCATTGGTGGGAGCTGATGGAACCAGAGTTCAAGCTTTAGCAGTATGTCATGAGGACACTTCGATTTGGGACCCAAATGCTTTGGCTTTTCAAGTGCTCAAAGTTAAGCCAGGAACTTGGCCCATCTGTCATTTCCTTCCCAATGGTCATTTTGTGTGGGTTCCAAACTAG 744 0.4382 MQYERVYGNPQKAGGSSVSAGKNSPNMQQGHQDGTSTGNVFLEKDLHPGTKMMVRFTKTSSAAHFLPQQVAESIPFSSNKLPEILNQFSVKENSAEAKIIQKTIEECEKPAIEGEEKYCARSLESLIDFSTSKLGKNIRALPNVVEGEIQEYKFGEGAKMLGEKSVVCHQLNYPYAVALCHAFHMTKIYKVPLVGADGTRVQALAVCHEDTSIWDPNALAFQVLKVKPGTWPICHFLPNGHFVWVPN* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0399 247 MobiDBLite consensus disorder prediction 12 39 - -
Vvi4g0399 247 Pfam BURP domain 40 246 IPR004873 -
Vvi4g0399 247 ProSiteProfiles BURP domain profile. 40 247 IPR004873 -
Vvi4g0399 247 SMART BURP_2 38 247 IPR004873 -
Vvi4g0399 247 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 29 247 IPR044816 -
Vvi4g0399 247 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0399 Vvi-Chr4 3464865 3465608 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0399 - - vvi:104879006 509.605