Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0398 ATGAAGTACTTGTGGCAGCTGGTGGTGGTCAGCCATGCTTATTCTCTACCTTCCGAGGTTGATTGGATGTCGGGTTTGCCTAACACTCCCTTCCCGAAAGCTATGCGGAATCTCTTAATGCAGCCTGTCTATGGAAGCACGAAAAAACAGGGGGATGCTAGTCCAATTGCTGGATATGATGCAGTCTATGGAAGCACGAAAAAACAAGGGAATGCTAGTCCAATTGCTGGATATGATGCAGTCTATGGAAGCACTCGAAAACAAGGGGATGCTAGTCCAATTGCTGGATATGCTGCAGTCTATGGAAGCACGAAAAAACAAGGGGATGCCAGTCCAATTTCTGGATATGATGCAGTCTATGGAACCTCTCAAAAAGCAGAAGGAAGTTCCATCAATGTTCACAAGGATGCTAGCTCAATTGCCGGATATGATGCAGTCTATGGAACCCCTAAAAAAGCAATAGAAAGTTCCACCAAAGCTCACAAGGATGCTAGCCAAATTGCTGGATATGATGCAGTCTATGGAAACTCTCAACAAAAAGCAGGAGGAAGTTCTATCAATGCTCACAAAGATTCTAGCCCAGTTGCGAGTTATGGTGCAGTTAATGTGTTTTTGGAAAAAGACCTGCATCCTGGGACAAAAATGGCTGTGCGCTTCACAAAAACCTCAAGTGCAGCTCATTTCTTGCCCCATCAAGTTGCTGAATCCATACCTTTTTCATCAAACAAGCTACCAGAAATTTTGAAGCGATTCTCCGTGAAAGAAAACTCCGCAGAAGCCCAGATGATACAGAAAACAATAAAACAATGTGAGACACCTGCCATAGTAGGAGAAGTTAAGTACTGTGCGAGGTCCTTGGAGTCCCTAATTGATTTCAGCACTTCAAGGCTGGGAAAAAACATTCGAGTTCTCTCCAATGAGGTGGAAGCGGATATCCAGGAGTATAAATTTGGAGAGGGAGTGAAGATGGTGGGAGAGAAATCAGTGGTGTGCCACCAGCTGAACTATCCATATGCTGTGGCATTCTGCCATACACTTCACATGACAAAGATTTACATGGTTCCATCGGTGGGTGCTGATGGAACCGGAGTTGAAGCTGTAGCAGTTTGTCACCGGGACACTTCAACTTGGGACCCAAAGGCTTTGGTCTTTCAAAGGCTCAAAGTTAAGCCAGGAACTTTGCCCATCTGCCATTTCCTTCCCAATGGTCATATTGTCTGGGTTCCAAAGTAG 1233 0.4501 MKYLWQLVVVSHAYSLPSEVDWMSGLPNTPFPKAMRNLLMQPVYGSTKKQGDASPIAGYDAVYGSTKKQGNASPIAGYDAVYGSTRKQGDASPIAGYAAVYGSTKKQGDASPISGYDAVYGTSQKAEGSSINVHKDASSIAGYDAVYGTPKKAIESSTKAHKDASQIAGYDAVYGNSQQKAGGSSINAHKDSSPVASYGAVNVFLEKDLHPGTKMAVRFTKTSSAAHFLPHQVAESIPFSSNKLPEILKRFSVKENSAEAQMIQKTIKQCETPAIVGEVKYCARSLESLIDFSTSRLGKNIRVLSNEVEADIQEYKFGEGVKMVGEKSVVCHQLNYPYAVAFCHTLHMTKIYMVPSVGADGTGVEAVAVCHRDTSTWDPKALVFQRLKVKPGTLPICHFLPNGHIVWVPK* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0398 410 Pfam BURP domain 203 409 IPR004873 -
Vvi4g0398 410 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 14 409 IPR044816 -
Vvi4g0398 410 SMART BURP_2 201 410 IPR004873 -
Vvi4g0398 410 ProSiteProfiles BURP domain profile. 203 410 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0398 Vvi-Chr4 3442275 3461011 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0398 - - vvi:100250915 740.725