Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0395 ATGGAGTTTCATCTCGTTCCCATTCTGACTTCTTTCTTGCTGGTGGTGGTGGTGGTGAGCCATGCTTATTCTCTACCTTCCGAGGTTGATGGGAAGTCGGCTTTGCCTACCACTCCCTTCCGGAAAGCTGTGCGGAATCTCTTAATGCAGCCTGGAAGAAGTTCTACCGATGCTCAAAAGCATGCTAGCTCGATTGCCGAATATGAAGCAGTCTATGGAAACCCTCAAAAAGTAGAAGGAAGTCCTATCAATTCTCACAAGGATGCTAGCTCAATTGCCGGATATGATGCAGTCTATGGAAACCCTCAGAAAGCTAGAGGAAGTTCTATCAAGGCTCACAATGATGCTAACTCAGTTGCCGCATATGATGCAGTCTACGGAAACCCTCAAAAATTAGGAGGAAGTTCTATCAAAGCTCACAATGATGCTAACTCCGTTGCCGGTTATGATGCAGTCTATGGAAACCCTCAAAAATTAGGAGGAAGTTCTACCAATGCTCATGACAAAGATGCTAGCGCAATTGCTGGATATGATGCAGTCTATGGAAGCACTCAAAAACAAGGGGATGCTAGTCCAATTGCTGGATATGATGCAGTCTATGGAAGCACTCGAAAACAAGGGGATGCTAGTCCAATTGCTGGGTATGATGCAGTCTATGGAAGCACTAAAAAACAAGGGGATGCTAGTCCAATTGCTGGCTATGATGCAGTCTATGGAAGCACTCAAAAACAAGGGGATGCTAGTCCAATTGCTGGATATGATGCAGTCTATGGAACCTCTCAAAAAGCAGAAGGAAGTTCCATCAATGTTCACAAGGATGCTAGCTCAATTGCCGGATATGATGCAGTCTATGGAAACTCTCAACAAAAAGCAGGAGGAAGTTCTATCAATGCTTACAAAGATTCTAGCCCAGTTGCGGGGTATGATGCAGTTAATGTGTTTTTGGAAAAAGACCTGCATCCTGGGACAAAAATGGCGGTGCGCTTCACAAAAACCTCAAGTGCAGCTCATTTCTTGCCCCATCAAGTTGCTGAATCCATACCTTTTTCATCAAACAAGCTACCAGAAATTTTGAAGCGATTCTCCGTGAAAGAAAACTCCGCAGAAGCCCAGATAATACAGAAAACAATAAAACAATGTGAGACGCCTGCCATAGTAGGAGAAGTTAAGTACTGTGCGAGGTCCTTGGAGTCCCTAATTGATTTCAGCACTTCAAGGCTGGGAAAAAACATTCGAGTTCTCTCCAATGAGGTGGAAGCGGATATCCAGGAGTATAAATTTGGAGAGGGAGTGAAGATGGTGGGAGAGAAATCAGTGGTGTGCCACCAGCTGAACTATCCATATGCTGTGGCATTCTGCCATACACTTCACATGACAAAGATTTACATGGTTCCATTGGTGGGTGCTGATGGAACCGGAGTTGAAGCTGTAGCAGTTTGTCACCGGGACACGTCAACTTGGGACCCAAAGGCTTTGGTCTTTCAAAGCCTCAAAGTTAAGCCAGGAACTTTGCCCATCTGCCATTTCCTTCCCAATGGTCATACTGTCTGGGTTCCAAAGTAG 1563 0.4504 MEFHLVPILTSFLLVVVVVSHAYSLPSEVDGKSALPTTPFRKAVRNLLMQPGRSSTDAQKHASSIAEYEAVYGNPQKVEGSPINSHKDASSIAGYDAVYGNPQKARGSSIKAHNDANSVAAYDAVYGNPQKLGGSSIKAHNDANSVAGYDAVYGNPQKLGGSSTNAHDKDASAIAGYDAVYGSTQKQGDASPIAGYDAVYGSTRKQGDASPIAGYDAVYGSTKKQGDASPIAGYDAVYGSTQKQGDASPIAGYDAVYGTSQKAEGSSINVHKDASSIAGYDAVYGNSQQKAGGSSINAYKDSSPVAGYDAVNVFLEKDLHPGTKMAVRFTKTSSAAHFLPHQVAESIPFSSNKLPEILKRFSVKENSAEAQIIQKTIKQCETPAIVGEVKYCARSLESLIDFSTSRLGKNIRVLSNEVEADIQEYKFGEGVKMVGEKSVVCHQLNYPYAVAFCHTLHMTKIYMVPLVGADGTGVEAVAVCHRDTSTWDPKALVFQSLKVKPGTLPICHFLPNGHTVWVPK* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0395 520 ProSiteProfiles BURP domain profile. 313 520 IPR004873 -
Vvi4g0395 520 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 24 519 IPR044816 -
Vvi4g0395 520 SMART BURP_2 311 520 IPR004873 -
Vvi4g0395 520 Pfam BURP domain 313 519 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0395 Vvi-Chr4 3435427 3438849 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0395 - - vri:117912221 867.455