Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0394 ATGAGCAGAAATGTGGGGTCCACACTACCCAAAATTTTGAACCGGCTTTTAGTGAAGGAAAATTCTGTAGAAGCTGAGCTGATGAAGAAGATAGAAGAGTGTGAGGAGGCTGTCATGGATGGAGAATCTAGGTTCTGTGCAACATCATTAGAGTCCCTAATCGATTTCAACACTTCAAAGCTCGGAAGAAATGTGAATGTGCTGATGAATGAGGTCAAAACGGGAAGCCAGGAGTTTGAATTTGGAGTGGGAACGAAGAAGGTTGCAGACAAATCAGTGGTGTGCCATAAGATGAACTACCCATATGTTGTTTTCTACTACCATACATTAACTAAGACACGAACTTACATGATTCCATTGGTTGGTGCTGATGGAAGCAAATCTAAAGCCATGGCAGCTTGTCACAGTGATACATCATGTGGCCTTCCAAGTGCTCAAAATTAA 444 0.4212 MSRNVGSTLPKILNRLLVKENSVEAELMKKIEECEEAVMDGESRFCATSLESLIDFNTSKLGRNVNVLMNEVKTGSQEFEFGVGTKKVADKSVVCHKMNYPYVVFYYHTLTKTRTYMIPLVGADGSKSKAMAACHSDTSCGLPSAQN* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0394 147 SMART BURP_2 1 147 IPR004873 -
Vvi4g0394 147 ProSiteProfiles BURP domain profile. 1 147 IPR004873 -
Vvi4g0394 147 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 7 140 IPR044816 -
Vvi4g0394 147 Pfam BURP domain 8 140 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0394 Vvi-Chr4 3425927 3426370 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0394 - - vvi:100256058 296.204