Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0392 ATGGAGTTTCGTTCCTTTCCCTTTCTGGCTTTTCTTTCTGTGATGGTGGTAGTAATCCATGCTTCTCAACCTGATGAGGATTACTGGAAGTTGGCTTTGCCTCACACTCCCATGCCTAAAGCTATACGAGATCTGTTGCAGTCCAAAGGTCTAAGTTCTGTCGATGCTTCTACTGCATCTTGTACTGTTCACATTCATTTCGATAAATTCTCTCAACCCGCCGGAGAAGAGGCTCAAGTAGATGACTCAAAAATAGGTAACTTCTTCTTGGAAACAGACCTGCATCCAGGTAAAAAAATGAAGCTGAACTTGGCCACAACTACAAATGGAGCTGTTTTCTTGCCTCATCAAGTTGCTGAATCCATGCCCTTTTCATCCAACAAGCTACCCGAAATCTTGAACCGGTTTTCCCTGAAAGAAAACTCCGCAGAAGCCGAGATAATAAAGAAGGAGCTAGAGGAATGTGAGGAGCCTGCCATGGAAGGAGAAGCCAGGTACTGTGCAACATCATTACAGTCCCTAATCCATTTCAGCACTTCAAAGCTTGGAAGGAATGTGAATGTGCTGACGAATGAGGTCAAAACGGGGAGCCAGGAGTATGAGTTTGGAGTGGGGATGAAGAGGGTTGCAGACAAATCAGTAGTGTGCCATAAGATGAACTACCCATATGCTGTTTTCTACTGCCATACATTCACTAAGACACGGACTTACATGATTCCGTTGGTGGGTGCTGATGGAAGCAAAGCTAAAGCCATGGCAGCTTGTCATAGTGATACATCAGCTTGGCACCCAAAACATGTGGCCTTCAAAGTGCTCAATGTTAAGCCAGGAACAGTCCCTATCTGCCATTTCGTTCACAACAATGCCATGGTCTGGATTCCAAAATAG 888 0.4493 MEFRSFPFLAFLSVMVVVIHASQPDEDYWKLALPHTPMPKAIRDLLQSKGLSSVDASTASCTVHIHFDKFSQPAGEEAQVDDSKIGNFFLETDLHPGKKMKLNLATTTNGAVFLPHQVAESMPFSSNKLPEILNRFSLKENSAEAEIIKKELEECEEPAMEGEARYCATSLQSLIHFSTSKLGRNVNVLTNEVKTGSQEYEFGVGMKRVADKSVVCHKMNYPYAVFYCHTFTKTRTYMIPLVGADGSKAKAMAACHSDTSAWHPKHVAFKVLNVKPGTVPICHFVHNNAMVWIPK* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0392 295 ProSiteProfiles BURP domain profile. 88 295 IPR004873 -
Vvi4g0392 295 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 20 294 IPR044816 -
Vvi4g0392 295 Pfam BURP domain 88 293 IPR004873 -
Vvi4g0392 295 SMART BURP_2 86 295 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0392 Vvi-Chr4 3391799 3393063 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0392 - - vvi:100254233 579.711