Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0391 ATGGAGTTCCTTCGTCCTCTTCCCATTCTGGCTTTTCTTTCAGTGGTGGTGGTAGTAAGCCATGCTTCTCTACCTTCTGAGGGTTACTGGAAGTTGGTTTTGCCTCACACTCCCATGCCCAAAGCTGTGAAGGATCACTTGCAGCCTGGTGTAACTTCTTTCAATGCTTCTGCTGCTGCTTTTTGTTTGGGGATTTACTATGGGTTCAACAAAATCCCTCAACCATTCCATGCAAAGCAGGCCCAAGATGGCTTAAATATAGGTAACTTCTTCTTGCAAACAGATCTGCACCCAGGTACAAAAATGGTGCTGCAGTTGCCACAAACTACAAATGAAGCTATGTTCTTGCCTCGTCAAGTTGCTGACTCCATACCTTTTTCATCTAAGAAGCTACCCGAAATTTTGAACCGGCTTTCAGTGAAGGAAAAATCTGCAGAAGCTGAGCTGATGAAGAAGGAGATAGAAAAGTGTGAGGAGCCTGCCATGGATGGAGAATCTAGGTTCTGTGCAACATCATTAGAGTCCCTAATCGATTTTAGCACTTCAAAGCTCGGAAGAAATGTGAATGTGCTGACGAATGAGGTTAGAATGGGAAGCCAAGAGTTTGAATTTGGAGTGAGAATGAAGAAGGTTGCAGACAAATCAGTGGTGTGCCATAAGATGAACTACCCATATGCTGTTTTCTACTGCCATACATTCGCTAAGACACGGACTTACATGATTCCATTGGTGGGTGATGATGGAAGCAAAGCTAAAGCCATGGCAGCTTGTCACAGTGATACGTCAGCTTGGCACCCACAGCATGTGGCCTTCCAAGTGCTCAAAATTAAGCCAGGAACGGTCCCTATCTGTCATTTCCTTCACAACAATGCCATGGTCTGGATTCCAAAGTAA 894 0.4474 MEFLRPLPILAFLSVVVVVSHASLPSEGYWKLVLPHTPMPKAVKDHLQPGVTSFNASAAAFCLGIYYGFNKIPQPFHAKQAQDGLNIGNFFLQTDLHPGTKMVLQLPQTTNEAMFLPRQVADSIPFSSKKLPEILNRLSVKEKSAEAELMKKEIEKCEEPAMDGESRFCATSLESLIDFSTSKLGRNVNVLTNEVRMGSQEFEFGVRMKKVADKSVVCHKMNYPYAVFYCHTFAKTRTYMIPLVGDDGSKAKAMAACHSDTSAWHPQHVAFQVLKIKPGTVPICHFLHNNAMVWIPK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0391 297 Coils Coil 135 155 - -
Vvi4g0391 297 SMART BURP_2 88 297 IPR004873 -
Vvi4g0391 297 Pfam BURP domain 90 295 IPR004873 -
Vvi4g0391 297 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 18 296 IPR044816 -
Vvi4g0391 297 ProSiteProfiles BURP domain profile. 90 297 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0391 Vvi-Chr4 3380236 3381339 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0391 - - vvi:100259346 600.897