Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0390 ATGAAGATGAACTTGGCCACAACTACAAATGGAGCTGTTTTCTTGCCTCATCAAGTTGCTGAATCCATACCCTTTTCATCCAACAAGCTACCTGAAATCTTGAACCGGTTTTCCCTGAAAGAAAAATCCACAGAAGCCGAGATAATAAAGGAGCTAGAGGAATGCGAGGAGCCTGCCATGGAAGGAGAAGCAAAGTACTGTACAACATCATTAGAGTCCCTAATCGATTTCAGCACTTCAAAGCTTGGAAGAAATGTGAATGTGCAGGCGAATGAGGTCAAAACGGGGAGCCAGGAGTATGAGTTTGGAGTGGGAATGGAGAAGCTTGCCGACAAATCAGTGGTGTGCTATAAGATGAACTACCCATATGCTGTTTTCTACTGCCATACATTCACTAAGACACGGACTTACATGATTCCGTTGGTGGGTGCTGATGGAAGCAAAGCTAAAGCCATGTCAGCTTGTCATAGTGACAGATCAGCTTGGCACCCAAAACATGTGGCCTTCAAAGTGCTCAATGTTAAGCCAGGAACAGTCCCTGTCTGCCATTTCGTTCACAACAATGCCATGGTCTGGATTCCAAAATAG 588 0.449 MKMNLATTTNGAVFLPHQVAESIPFSSNKLPEILNRFSLKEKSTEAEIIKELEECEEPAMEGEAKYCTTSLESLIDFSTSKLGRNVNVQANEVKTGSQEYEFGVGMEKLADKSVVCYKMNYPYAVFYCHTFTKTRTYMIPLVGADGSKAKAMSACHSDRSAWHPKHVAFKVLNVKPGTVPVCHFVHNNAMVWIPK* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0390 195 Pfam BURP domain 6 193 IPR004873 -
Vvi4g0390 195 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 3 194 IPR044816 -
Vvi4g0390 195 SMART BURP_2 2 195 IPR004873 -
Vvi4g0390 195 ProSiteProfiles BURP domain profile. 1 195 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0390 Vvi-Chr4 3376461 3377048 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0390 - - vvi:100261144 387.111