Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0388 ATGGATGGAGAATCTAGGTTCTGTGCAACATCATTAGAGTCCCTAATCGATTTCAGCACTTCAAAGCTCGGAAGAAATGTGAATGTGCTGACGAATGAGGTCAAAACGGGAAGCCAAGAGTATGAATTTGGAGTGGGAATGAAGAAGGTTGCAGACAAATCAGTGGTGTGCCATAAGATGAACTACCCATATGCTGTTTTCTATTGCCATACCTTCACTAAGACACGAACTTACATGATTCCATTGGTGGGTGCTGATGGAAGCAAAGCTAAAGCCATGGCAGCTTGTCACAGTGATACATCAGCTTGGCACCCACAGCATGTGGCTTTCCAAGTGCTCAAAATTAAGCCAGGAACGGTCGCAGTCTATCATTTCCTTCACAACAATGCCATGGTCTGGATTCCAAAGTAA 411 0.4428 MDGESRFCATSLESLIDFSTSKLGRNVNVLTNEVKTGSQEYEFGVGMKKVADKSVVCHKMNYPYAVFYCHTFTKTRTYMIPLVGADGSKAKAMAACHSDTSAWHPQHVAFQVLKIKPGTVAVYHFLHNNAMVWIPK* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0388 136 SMART BURP_2 2 136 IPR004873 -
Vvi4g0388 136 ProSiteProfiles BURP domain profile. 1 136 IPR004873 -
Vvi4g0388 136 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 2 135 IPR044816 -
Vvi4g0388 136 Pfam BURP domain 1 134 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0388 Vvi-Chr4 3368502 3368912 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0388 - - vvi:104879049 285.804