Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0386 ATGAAGAAAACGATACAAGATTGCGAACAACCAGCCCTGGAAGGAGATTCCAGGTTTTGTGCCACATCCTTGGAATCCTTAATTGATTTAAGCATTTCAAAGCTTGGAAAAAACATCAAACTAATCTCAAATGGAGTTGAAATGGGAAGCCAAGAATACGAACTCGGAGTGGGAGTGAAGGTGGTTGCAGACAAATCAGTGGTGTGCCATAAGCAGAAGTATCCATACGCTGTGTTTTACTGCCATGCAATCCATAAGACGAGGGTTTACACACTTCCATTTGTGGGAACCGAGGATGGAACCAAAGCTGAGGTTGTGGCTTCTTGCCATATAGATATGTCGGCTTGGAACCCGAAGCATGCGACCTTTCAAGTGCTGAAAGTTAAACCAGGAACTGTCCCTGTTTGCCACTTCCTTCCTCGTGATGATCTCATCTAG 438 0.4452 MKKTIQDCEQPALEGDSRFCATSLESLIDLSISKLGKNIKLISNGVEMGSQEYELGVGVKVVADKSVVCHKQKYPYAVFYCHAIHKTRVYTLPFVGTEDGTKAEVVASCHIDMSAWNPKHATFQVLKVKPGTVPVCHFLPRDDLI* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0386 145 Pfam BURP domain 1 145 IPR004873 -
Vvi4g0386 145 ProSiteProfiles BURP domain profile. 1 145 IPR004873 -
Vvi4g0386 145 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 1 144 IPR044816 -
Vvi4g0386 145 SMART BURP_2 1 145 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0386 Vvi-Chr4 3338865 3339302 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0386 - - vri:117910550 283.878