Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0384 ATGGGGAGCCAGGAATACAGACTTGGAGTGGGAGTGAAGGTGGTTGCAGACAAATCAGTGGTGTGCCATAAGCAGAAGTACCCATACGCTGTGTTTTACTGCCATGCAATCCACAACACAAGGGTTTACACACTTCCATTTGTGGGAACCGAGGATGGAACCAAATCTGAAGTTGTGGTTTCTTGCCATATTGATACGTCAGCTTGGAACCCGAAGCATGCAGCCTTTAAAGTTCTGAAAGTTAAACCAGGAACTGTCCCTGTTTGCGATTTCCTTCCCCATGATGATATCATCTGGATTCCTAAATAA 309 0.4531 MGSQEYRLGVGVKVVADKSVVCHKQKYPYAVFYCHAIHNTRVYTLPFVGTEDGTKSEVVVSCHIDTSAWNPKHAAFKVLKVKPGTVPVCDFLPHDDIIWIPK* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0384 102 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 4 101 IPR044816 -
Vvi4g0384 102 ProSiteProfiles BURP domain profile. 1 102 IPR004873 -
Vvi4g0384 102 SMART BURP_2 1 102 IPR004873 -
Vvi4g0384 102 Pfam BURP domain 3 100 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0384 Vvi-Chr4 3334116 3334424 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0384 - - vvi:104879003 211.846