Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0382 ATGGCCTCTGATTCCATTCGGAATCGCATCGATCAGTTTTTTTCTTCAAAGAAAAGGAAACCGCTATCTCCTGGTTTGAAGACTGGAAGAATCGAAAAAGATTCAAAAAGAGCAGTCGATGGTTCTCCCAGTAGCAAGGGCACCTTAGACAACTATTTGGTAACTTATCCGGATGATAATTCCACTGCTCGTGGTTCATCAGCAGGAAAAGGCCCAGTCAAAAGAAATTTGACATTGGAGATTAATTTGCCTTCTAAAGATGAAAATGAAAATGCCCTTTTATCAGGCCAATTGGGTCATGGAACTACCGAAGCATTTGGAGAAACTCATACGGAAAATTCCCGGGGTTTATCTCAGATGGGTGGTGTTGGAGTTGGAGAGCAATTGAAGGATTGCTCAGTCTCTGCACATGGTCCCGTGAACTCGGAACTTAAGCAAATTGCAGCTGACTTTTTATCTCTTTATTGCAGTGAATTTCCATCAAGTGCAAGTTTGCCATCTGGATTGAAAGTGAATGTGAATAAAAGATGTGGCAGTCCATCTCTGCAAGATGTGAAGAATGAGATTTCCAAGAAGAGGCATTGCATTGCCAATGCGGACCAGTCCCGGTTAGAAGGTGAAGATTCTTGTTTAAACGAGAATAATTATGAAGATGGGCAGCTTGGTCTTATTGTTAAACCTGTAACAGTTGGAAATGATGCCACTGAAGTTCAAGGAAGCTTGAGAAAAAGCAATGAAAGACTAAAATCAACTGTTAATATGACCGAGTGCTATACACCTGGTCCATTGACTGTTAATGCATTTGCTCATGAAACCCCCAATTCAATGCGTGGAAGCTCCATGTTTTCACCTGGAGAATCATTCTGGAATGAAGCAATTCAAGTTGCTGATGGTTTGTTTGCTCCAAAAACTGATGAGCAAATTAATGCTGCCAAGAGCGAATATGAGATGAAGAACTCATGCAATTTGAGAAATGCTGGCTGTGGGTTTAAGTTGAAGGAAATGTTGGTTGACGGTGACTGCACAGTTGAGGGTATGGAAATAGGTGTTTCTTCTGGATCATTAGGATATCGTGTGAAAGATTCAGATCAAGTATCCCCACTGCCTGTTAAACGATTTGACTTCTTGTTTGAGGAAAAGAACTTGGATGAAACAAATCCACCTCATTGTTCTGCTGATAAGCTGGATGTTATGGATGGTGAACAATCTGCTTGTGGTTCCGTGAATCATAAGGTTCTAAAAACCACTGGTATTGTAATTGATTACTGCAAAGCTCAGACAAATGGAGGAATGAGTGAAGTAAAAGATATGAATTCAATTGATGCAGAAGCCAAAAGGGAAGTGGATTTATTGAGCCAAGAAAAGGATAACATCAAAGCTGATTCACCAGATTTGGGAATCACTAAATCCATTATTGCCTGTGAATGTGATGAAGCAAGTACTCCATCAAGTTTTGAGCCCCTGAAGGATAGTTTAGATCTTAGCAAATGGCTTCCTTCTGAGATATGCAACATATATAGAAAGAAAGGAATTTCAAAACTGTACTCTTGGCAGGTTGACTGCCTTAAGGTGGATGGCGTCTTGCAGAAAAGGAACCTTGTGTATTGTGCATCTACAAGTGCTGGCAAAAGTTTTGTTGCTGAAATTTTAATGTTGCGACGACTAATATCAACGGGAAAAATGGCACTTCTTGTACTTCCATATGTTTCAATTTGTGCAGAAAAGGCAGAGCATCTGGAAGTCCTCCTGGAACCACTTGGTAAGCATGTCCGTAGTTACTATGGAAATCAAGGTGGTGGAACACTTCCTAAAGACACTTCTGTAGCTGTATGCACAATTGAGAAGGCAAACTCTTTAATCAACAGATTGCTGGAAGAGGGTCGCCTGTCAGAAATTGGAATTATTGTAATAGATGAATTGCACATGGTTGGCGATCAGAATAGGGGTTATCTTTTGGAACTTCTGTTGACAAAGCTTCGTTATGCTGCTGGTGAAGGACATGTTGAATCAGTTAGTGGTGAGAGTTCAAATATGAGCAGTGGCAAATCTGATCCTGCTCATGGTCTGCAAATTGTTGGGATGAGTGCAACCATGCCTAATGTAGCAGCGGTTGCTGATTGGCTTCAAGCAGCATTGTACCAAACAGATTTCCGACCAGTTCCATTGGAGGAATACATTAAAGTTGGTAACACCATTTATGACAAGAAAATGGATATTATTAGGACAATATCGAAAACAGCTGATCTTGGTGGTAAAGATCCTGATCATATTGTGGAATTGTGCAATGAGGTTGTTCAGGAGGGTCATTCAGTGCTACTATTTTGCTCTAGTAGAAAAGGATGTGAATTTACTGCAAGGCATGTTTCAAAATTCCTCAAAAAATTCTCTACCAATGCCCATAACAATACTGGTGAGTTTGTTGATATTAGTTCAGCTATTGATGCCTTACGGAGATCTCCTGCGGGACTGGATCCTATACTGGAAGAAACTCTCCCTTCTGGTGTTGCCTATCACCATGCTGGCCTCACGGTTGAGGAAAGAGATATTGTCGAGACATGCTATCGCAAAGGGCTCCTACGTGTCTTAACTGCTACATCTACCTTAGCTGCTGGTGTTAACCTCCCTGCTAGGAGGGTCATTTTCCGACAACCAAGGATTGGTCGTGATTTTATTGATGGAACTAGGTACAAACAGATGGCTGGACGGGCTGGACGAACTGGAATAGATACAAAAGGGGAAAGTGTACTGATTTGCAAACCTGAGGAGGTCAAAAGAATTTGTGGACTTCTCAATGAGAGTTGTCCACCATTGTATTCTTGTCTCTCTGAAGATAAGAATGGAATGACTCATGCAATCTTGGAAGTTGTGGCTAGTGGAATTGTTCAAACTGCTAATGATATTAATCGATATGTTAGAAAATTTCTTGAATGGAATGAAGATACTAAGTTATACAGCACCACTCCTCTTGGACGGGCAGCTTTTGGCAGTTCTCTCTGTCCTGAAGAATCACTTGTTGTGCTGGATGATCTTTCAAGGGCACGAGAAGGATTTGTTCTTGCATCTGATTTGCATCTAGTTTACTTAGTGACACCCATTAATGTTGATGTTGAGCCAGATTGGGAATTGTTCTATGAAAGGTTCATGCAATTGTCTGCTCTTGACCAGTCAGTTGGCAATCGAGTTGGAGTGGTGGAACCATTTTTGATGCGCATGGCCCATGGTGCACCTATGTGTGCTTCAAACAAATCAAGAAATAATGGAAAAGGGTTGCATGACAAATTTGACAACCGACTTGGGATCACAAAATGTAGTTTGCTCTCAGATGAGCAAACACTTCGTGTTTGCAAGCGATTTTATGTTGCTCTCATCTTGTCAAAACTAGTGCAGGAAGTACCGGTGACTGAGGTTTGCGAAGCTTTTAAAGTGGCTAGAGGCATGGTTCAAGGCTTGCAAGAGAATGCTGGAAGGTTTGCGTCTATGGTTTCTTTGTTTTGTGAAAGGCTTGGCTGGAATGATTTGGAAGGCTTGGTTGCTAAGTTCCAAAATCGTGTTTCATTTGGAGTGAGAGCAGAGATCGTAGAGCTTACTACCATTCCATATGTTAAGGGTTCTCGAGCAAGAGCACTTTATAAAGCTGGCTTGCGTACACCTCTAGCAATTGCAGAAGCATCAATACCTGAGATAGTGAAAGCTCTGTTTGAATTTTCATCATGGGCTGCAGAAGGAAATTCAGTGCAACGAAATGTACAATTGGGAGTAGCCAAGAAGATTAAGAATGCTGCACGCAAAATTGTGCTTGATAAAGCTGAAGAAGCAAGGATTGCTGCTTTCTCAGCTTTCAAATCACTTGGGCTTAATGTTCCACAGTTTTCACGTCCTTTGTTGTTAATTGCTAATGACAATCCTAGCCAAGAAGCTGCAAGTACCTCTTCTGGGGAGGGTGCTACTAGTAGCTTTGTTGGTACAGAATGCATGAAATCAGGTAAGCCAGCTGTAGAAGGAAGTGAGAATTCTAATAAAGTTGCTTCAGAAATTGGAGTGGAGAAGTTAAAAAATATGTCAGATGTTATCTTGGGAACTGCAGGGGAGGTAAAATCAACTGGCCCCATACAGTGTAAATTTGGTGCTGAAAATCCTGCAGTACTGTCAATTCTCAATGATGAACTTAACAGCATTGTGGATCGTAATGAAAATGCAGTGATGCCACTTTCTATTAAGTCAATGAATACTGGTAATGGAAATGGGACATCGGATGCATATGTGGATCATGGTCAGCATGAGCAGCAAAGAGGAGAAAATGAATGTCTTGACAATAATGGCAAAGCCTATGAGAAGGGTCCTATTCATGCAACTAATACTCCTGGTGGGTTTGATTCTTTCTTAGATCTCTGGGATAGTGTGAGAGAATTCTATTTTGATATTCACTTCAACAAACAGTCTGAAGTAAATTCTCTTGCACCCTACGAAATACATGGCATAGCAATCTGTTGGGAAAATTCTCCTGTGTATTATATCAATCTTCCTAAGGATCTACTTTGCTCTGATGAAAGGAAAAATATTTACTTAACCATGAATGTATCTGATGACAAGCCAAACATTTTAGATGCAAATCATAGGTTGGAAGCAGCTAAATGGCGATGGAGCAAGGTTGGTAAGATAATGGGGAAAAAGGATGTCAGGAAATTTACTTGGAATTTGAAAGTTCAGATTCAGGTGCTAAAAAATCCTGCAGTTTCCATTCAAAAATTTGGTAGTCTGAATCTTGCAATGAGAACTATGGGACTTGAACTTATAGACAACTCCTACCTTATGTTGTCCCCAGTTTATATTGTGGATGGACTAGACATGTGTATTGTAACATGGATCCTTTGGCCTGATGAAGAGAGAAGCTCCAATCCAAATCTGGAGAAGGAAGTTAGGAAAAGATTATCCAGTGAGGCAGCAGCAGCTGCTAATCGGAGCGGAAGGTGGAAAAATCAGACTCGAAGAGCTGCCCATAATGGTTGCTGCCGTCGCGTTGCACAAACACGTGCCCTATGTTCCGTTCTATGGAAATTGCTTGTTTCTGAAGAACTTGTTGAAGTGCTTTTGAGAATTGAAATCCCATTGGTTACAATTCTTGCGGACATGGAAGTCTGGGGAATAGGTGTTGATATGGAGGGATGCATTCAGGCACGAAATGTGCTGGGAAAGAAGCTAAGGCATCTTGAAAAGGAAGCTTATGAGTTGGCTGGCATGACATTTTCATTGTATACAGCAGCAGATATTGCTAATGTTCTCTATGGACACTTGAAGCTGCCCATACCAGAGGGGCACAATAAAGGGAAGCAACATCCAAGTACTGATAAGCATTGCTTAGATTTGTTAAGGCATGAACATCCTATTATTCCAGTCATTAAAGAACACCGGACACTGGCAAAACTCTTAAACTGTACATTGGGTTCAATTTGTTCTCTGGCTAGGCTTTCTTTGCAGACGCAAAGATACACCCTGCATGGCCATTGGCTCCAAACATCAACAGCGACTGGACGCCTTTCAATGGAAGAACCTAACCTTCAGTGTGTTGAGCATGTGGTTGAGTTCAAAATGATCAAAGGTAACAAAGATGTATGCAATTCTGAAGCTGACCATTACAAAATTAATGCTCGTGACTTCTTCGTTCCTTCTCAGGAGAACTGGTTACTGTTAACAGCGGATTATTCCCAGATTGAACTGCGGCTAATGGCTCATTTTTCTAGGGACTCTTCATTAACTGAACTCCTTAGCAAGCCCCATGGTGATGTCTTTACCATGATTGCAGCAAAATGGACTGGGAAGCCAGAATCTGTTGTTGGCTACCAGGAGCGAGAACAGACCAAAAGGTTGGTCTATGGCATTCTTTATGGAATGGGTGCTAATACCCTTGCCAAACAGCTAGAATGTAGCTTAGGTGAAGCAGAAGAAAAAATTCGAAGTTTTAGAAGTTCTTTTCCTGGTGTTGCTTCCTGGCTTCATGAAGCAGTTGCATGTTGCTGTAAGAAAGGATATGTGAAGACACTTAAGGGAAGAAAGCGCTTCTTGTCAAAAATAAAATTTGGGACTAGTAAAGAAAAATTGAAAGCTCGGAGGCAAGCTGTGAATTCCATTTGTCAGGGATCCGCTGCCGACATAATCAAGATTGCAATGATAAATATTCATTCTGTGATTGCTGAAGGAGTAGATGAGCCTAATTCTAGCACAGAACTTCCAGCAAAATTTCACATGCTGAAGGGGCGTTGCCGGATAATTCTACAGGTTCATGATGAACTAGTACTTGAAGTTGATCCTTCTGTTATGAAGGAAGCTGGATTGTTATTAAAAATGACCATGGAAAATTCTACCTCACTGCTGGTCCCTTTGCTTGTGAAGCTAAAGGTTGGAAGAACATGGGGTTCTTTGGAGCCTTTCCATGCTGAACCACTTGGAGATGAAATGCTTGTTCTGCAAAAAGATGTTTGA 6477 0.4121 MASDSIRNRIDQFFSSKKRKPLSPGLKTGRIEKDSKRAVDGSPSSKGTLDNYLVTYPDDNSTARGSSAGKGPVKRNLTLEINLPSKDENENALLSGQLGHGTTEAFGETHTENSRGLSQMGGVGVGEQLKDCSVSAHGPVNSELKQIAADFLSLYCSEFPSSASLPSGLKVNVNKRCGSPSLQDVKNEISKKRHCIANADQSRLEGEDSCLNENNYEDGQLGLIVKPVTVGNDATEVQGSLRKSNERLKSTVNMTECYTPGPLTVNAFAHETPNSMRGSSMFSPGESFWNEAIQVADGLFAPKTDEQINAAKSEYEMKNSCNLRNAGCGFKLKEMLVDGDCTVEGMEIGVSSGSLGYRVKDSDQVSPLPVKRFDFLFEEKNLDETNPPHCSADKLDVMDGEQSACGSVNHKVLKTTGIVIDYCKAQTNGGMSEVKDMNSIDAEAKREVDLLSQEKDNIKADSPDLGITKSIIACECDEASTPSSFEPLKDSLDLSKWLPSEICNIYRKKGISKLYSWQVDCLKVDGVLQKRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEIGIIVIDELHMVGDQNRGYLLELLLTKLRYAAGEGHVESVSGESSNMSSGKSDPAHGLQIVGMSATMPNVAAVADWLQAALYQTDFRPVPLEEYIKVGNTIYDKKMDIIRTISKTADLGGKDPDHIVELCNEVVQEGHSVLLFCSSRKGCEFTARHVSKFLKKFSTNAHNNTGEFVDISSAIDALRRSPAGLDPILEETLPSGVAYHHAGLTVEERDIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMAGRAGRTGIDTKGESVLICKPEEVKRICGLLNESCPPLYSCLSEDKNGMTHAILEVVASGIVQTANDINRYVRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLVVLDDLSRAREGFVLASDLHLVYLVTPINVDVEPDWELFYERFMQLSALDQSVGNRVGVVEPFLMRMAHGAPMCASNKSRNNGKGLHDKFDNRLGITKCSLLSDEQTLRVCKRFYVALILSKLVQEVPVTEVCEAFKVARGMVQGLQENAGRFASMVSLFCERLGWNDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPEIVKALFEFSSWAAEGNSVQRNVQLGVAKKIKNAARKIVLDKAEEARIAAFSAFKSLGLNVPQFSRPLLLIANDNPSQEAASTSSGEGATSSFVGTECMKSGKPAVEGSENSNKVASEIGVEKLKNMSDVILGTAGEVKSTGPIQCKFGAENPAVLSILNDELNSIVDRNENAVMPLSIKSMNTGNGNGTSDAYVDHGQHEQQRGENECLDNNGKAYEKGPIHATNTPGGFDSFLDLWDSVREFYFDIHFNKQSEVNSLAPYEIHGIAICWENSPVYYINLPKDLLCSDERKNIYLTMNVSDDKPNILDANHRLEAAKWRWSKVGKIMGKKDVRKFTWNLKVQIQVLKNPAVSIQKFGSLNLAMRTMGLELIDNSYLMLSPVYIVDGLDMCIVTWILWPDEERSSNPNLEKEVRKRLSSEAAAAANRSGRWKNQTRRAAHNGCCRRVAQTRALCSVLWKLLVSEELVEVLLRIEIPLVTILADMEVWGIGVDMEGCIQARNVLGKKLRHLEKEAYELAGMTFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIIPVIKEHRTLAKLLNCTLGSICSLARLSLQTQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHVVEFKMIKGNKDVCNSEADHYKINARDFFVPSQENWLLLTADYSQIELRLMAHFSRDSSLTELLSKPHGDVFTMIAAKWTGKPESVVGYQEREQTKRLVYGILYGMGANTLAKQLECSLGEAEEKIRSFRSSFPGVASWLHEAVACCCKKGYVKTLKGRKRFLSKIKFGTSKEKLKARRQAVNSICQGSAADIIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDELVLEVDPSVMKEAGLLLKMTMENSTSLLVPLLVKLKVGRTWGSLEPFHAEPLGDEMLVLQKDV* 2159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0382 2158 FunFam DNA polymerase I 1903 2047 - -
Vvi4g0382 2158 FunFam Helicase and polymerase-containing protein TEBICHI 730 927 - -
Vvi4g0382 2158 Gene3D - 496 719 IPR027417 -
Vvi4g0382 2158 FunFam Helicase and polymerase-containing protein TEBICHI 1714 1826 - -
Vvi4g0382 2158 Pfam Helicase conserved C-terminal domain 756 907 IPR001650 -
Vvi4g0382 2158 SUPERFAMILY DNA/RNA polymerases 1692 2139 IPR043502 -
Vvi4g0382 2158 Pfam DNA polymerase family A 1722 2137 IPR001098 GO:0003677|GO:0003887|GO:0006260
Vvi4g0382 2158 Gene3D - 726 927 IPR027417 -
Vvi4g0382 2158 Gene3D Taq DNA Polymerase; Chain T, domain 4 1714 1824 - -
Vvi4g0382 2158 MobiDBLite consensus disorder prediction 1303 1323 - -
Vvi4g0382 2158 SMART ultradead3 510 725 IPR014001 -
Vvi4g0382 2158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 527 921 IPR027417 -
Vvi4g0382 2158 PRINTS DNA-polymerase family A (pol I) signature 2008 2019 IPR002298 GO:0003887|GO:0006261
Vvi4g0382 2158 PRINTS DNA-polymerase family A (pol I) signature 1949 1974 IPR002298 GO:0003887|GO:0006261
Vvi4g0382 2158 PRINTS DNA-polymerase family A (pol I) signature 1986 1997 IPR002298 GO:0003887|GO:0006261
Vvi4g0382 2158 PRINTS DNA-polymerase family A (pol I) signature 2040 2056 IPR002298 GO:0003887|GO:0006261
Vvi4g0382 2158 PRINTS DNA-polymerase family A (pol I) signature 1831 1853 IPR002298 GO:0003887|GO:0006261
Vvi4g0382 2158 MobiDBLite consensus disorder prediction 41 67 - -
Vvi4g0382 2158 Gene3D - 1903 2047 - -
Vvi4g0382 2158 Pfam DEAD/DEAH box helicase 527 700 IPR011545 GO:0003676|GO:0005524
Vvi4g0382 2158 CDD DEXHc_POLQ-like 498 719 - -
Vvi4g0382 2158 FunFam Helicase and polymerase-containing protein TEBICHI 1068 1211 - -
Vvi4g0382 2158 CDD DNA_pol_A_theta 1714 2139 - -
Vvi4g0382 2158 MobiDBLite consensus disorder prediction 1303 1339 - -
Vvi4g0382 2158 SMART polaultra3 1879 2104 IPR001098 GO:0003677|GO:0003887|GO:0006260
Vvi4g0382 2158 FunFam Helicase and polymerase-containing protein TEBICHI 1453 1711 - -
Vvi4g0382 2158 FunFam Helicase and polymerase-containing protein TEBICHI 498 719 - -
Vvi4g0382 2158 Gene3D - 1449 1711 IPR036397 GO:0003676
Vvi4g0382 2158 SMART helicmild6 825 907 IPR001650 -
Vvi4g0382 2158 Coils Coil 441 461 - -
Vvi4g0382 2158 MobiDBLite consensus disorder prediction 25 40 - -
Vvi4g0382 2158 Gene3D - 1840 2136 - -
Vvi4g0382 2158 Coils Coil 1969 1989 - -
Vvi4g0382 2158 CDD SF2_C_Ski2 718 919 - -
Vvi4g0382 2158 Gene3D - 1068 1211 - -
Vvi4g0382 2158 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 524 716 IPR014001 -
Vvi4g0382 2158 MobiDBLite consensus disorder prediction 1 75 - -
Vvi4g0382 2158 Pfam Helix-turn-helix domain 912 975 IPR046931 -
Vvi4g0382 2158 PANTHER DNA POLYMERASE I 527 2141 IPR002298 GO:0003887|GO:0006261
Vvi4g0382 2158 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 756 975 IPR001650 -
Vvi4g0382 2158 SUPERFAMILY Sec63 N-terminal domain-like 1110 1224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0382 Vvi-Chr4 3298715 3326185 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0382 K02349 - vvi:100264582 4219.85