Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0379 ATGCCAAAAGCTATCAGGGATATTCTTCGGCCAGATCTTATGGAAGAAAAAGGCACTTCCGTAAGTGTAGGGAAGGGCGGGGTAAATGTCCATGCAGGAAAAGGCAAATCCGGAGGCGGCACCACTGTCGGGGTGGGCAAAGGCACTGGGGTAAATGTTCACGCAGGAAAAGGAAAACCTGGAGGTGGCACCACTGTTGGCGTCGGCAAAGGAGGAGTATCTGTTAACGCAGGCCACAAGGGAAAGCATGTATATGTTGGTGTTGGTAAAGGGAAAAGTAAATCACCCTTCGATTACAAGTATGCTGCTACTGAGGATCAGCTCCATGATGATCCAAATGTAGCTCTTTTCTTCTTTGAGAAGAACATGCAACCTGGGACAAAGATGGAGTTGCACTTCATTAGGGATGCAAATCTAGCCACCTTCTTGCCTCGTCAAGTTGCCAACTCCATACCTTTTTCATCCAAAAAATTCCCAGAAATTCTGAACGAGTTCTCGATAAAACCAGAATCAGAAGAAGCTGAGACAATCAAGAACACAATCAGAGAGTGTGAGGAGCCTGGGATTAAAGGAGAGGAAAAGTATTGTGCAACTTCACTAGAATCCATGGTTGATTTCAGCACCTCAAAGCTTGGAAAAGGTGTTCAGGTGATTTCAACAGAGGTGGAGAAGGAAACCCCGGAGCAGCAGTACACAATTACAACTGGGGTGAAGAAGCTGGCAGGTGACAAAGCTGTGGTGTGTCACAAGCAGAGCTATCCCTATGCAGTGTTTTACTGCCACAAGACTCAGACCACAAGGGCTTATATGGTTCCCTTGGTGGGTGCTGATGGGTCCAAAGTTAAAGCAGTAGCTGTGTGCCATACAGACACATCGGCATGGAACCCCAAGCATTTGGCTTTTCAAGTGCTCAAAGTTAAGCCAGGAACTGTTCCAATCTGCCATTTCCTTCCTGAGGATCACGTTGTCTGGGTTCCAAAATAG 984 0.4685 MPKAIRDILRPDLMEEKGTSVSVGKGGVNVHAGKGKSGGGTTVGVGKGTGVNVHAGKGKPGGGTTVGVGKGGVSVNAGHKGKHVYVGVGKGKSKSPFDYKYAATEDQLHDDPNVALFFFEKNMQPGTKMELHFIRDANLATFLPRQVANSIPFSSKKFPEILNEFSIKPESEEAETIKNTIRECEEPGIKGEEKYCATSLESMVDFSTSKLGKGVQVISTEVEKETPEQQYTITTGVKKLAGDKAVVCHKQSYPYAVFYCHKTQTTRAYMVPLVGADGSKVKAVAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHVVWVPK* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0379 327 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 1 326 IPR044816 -
Vvi4g0379 327 SMART BURP_2 115 327 IPR004873 -
Vvi4g0379 327 MobiDBLite consensus disorder prediction 19 43 - -
Vvi4g0379 327 ProSiteProfiles BURP domain profile. 117 327 IPR004873 -
Vvi4g0379 327 Pfam BURP domain 116 326 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0379 Vvi-Chr4 3274729 3275969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0379 - - vvi:100233124 589.341